Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 CROCCP5-201ENST00000436658 830 ntBASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 AC026185.1-201ENST00000445748 174 ntBASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 FAM201B-201ENST00000458407 597 ntBASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 SF1-220ENST00000626028 704 ntTSL 2 BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYNE2Q8WXH0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 AC010864.1-201ENST00000609407 1511 ntBASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC9.93□□□□□ -0.82
SYNE2Q8WXH0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 FAM210CP-201ENST00000445714 574 ntBASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 AC010331.1-201ENST00000611423 582 ntBASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 GXYLT1P2-201ENST00000433312 1230 ntBASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC9.92□□□□□ -0.82
SYNE2Q8WXH0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 AK1-201ENST00000223836 736 ntTSL 3 BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC9.91□□□□□ -0.82
SYNE2Q8WXH0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 AL358852.1-201ENST00000623174 1268 ntBASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 AC092118.2-201ENST00000613495 667 ntBASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 AC073111.5-205ENST00000641717 521 ntBASIC9.9□□□□□ -0.82
SYNE2Q8WXH0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
SYNE2Q8WXH0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC9.9□□□□□ -0.83
SYNE2Q8WXH0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
SYNE2Q8WXH0 NCF1B-203ENST00000435988 1254 ntBASIC9.89□□□□□ -0.83
SYNE2Q8WXH0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SYNE2Q8WXH0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC9.89□□□□□ -0.83
SYNE2Q8WXH0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC9.89□□□□□ -0.83
SYNE2Q8WXH0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
SYNE2Q8WXH0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC9.89□□□□□ -0.83
SYNE2Q8WXH0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 NTF6G-201ENST00000591094 616 ntBASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC9.88□□□□□ -0.83
SYNE2Q8WXH0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms