Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L1Q8WWY6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.52■□□□□ 0.55
MBD3L1Q8WWY6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.52■□□□□ 0.55
MBD3L1Q8WWY6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.52■□□□□ 0.55
MBD3L1Q8WWY6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MBD3L1Q8WWY6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MBD3L1Q8WWY6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.51■□□□□ 0.55
MBD3L1Q8WWY6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD3L1Q8WWY6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.51■□□□□ 0.55
MBD3L1Q8WWY6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MBD3L1Q8WWY6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD3L1Q8WWY6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD3L1Q8WWY6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
MBD3L1Q8WWY6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD3L1Q8WWY6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD3L1Q8WWY6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD3L1Q8WWY6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.5■□□□□ 0.55
MBD3L1Q8WWY6 AC005559.1-201ENST00000589661 871 ntBASIC18.5■□□□□ 0.55
MBD3L1Q8WWY6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.5■□□□□ 0.55
MBD3L1Q8WWY6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MBD3L1Q8WWY6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD3L1Q8WWY6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD3L1Q8WWY6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD3L1Q8WWY6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.49■□□□□ 0.55
MBD3L1Q8WWY6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
MBD3L1Q8WWY6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
MBD3L1Q8WWY6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MBD3L1Q8WWY6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MBD3L1Q8WWY6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.48■□□□□ 0.55
MBD3L1Q8WWY6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MBD3L1Q8WWY6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.48■□□□□ 0.55
MBD3L1Q8WWY6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.48■□□□□ 0.55
MBD3L1Q8WWY6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MBD3L1Q8WWY6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.47■□□□□ 0.55
MBD3L1Q8WWY6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
MBD3L1Q8WWY6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.47■□□□□ 0.55
MBD3L1Q8WWY6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.47■□□□□ 0.55
MBD3L1Q8WWY6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.47■□□□□ 0.55
MBD3L1Q8WWY6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 LINC00565-201ENST00000562710 2331 ntBASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L1Q8WWY6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
MBD3L1Q8WWY6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
MBD3L1Q8WWY6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 AC136428.2-201ENST00000563187 214 ntBASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L1Q8WWY6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 AC233723.2-201ENST00000623798 2106 ntBASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L1Q8WWY6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 EP400NL-214ENST00000641289 2402 ntBASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L1Q8WWY6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms