Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM4Q8WVI0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM4Q8WVI0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.18■□□□□ 0.82
SMIM4Q8WVI0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM4Q8WVI0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM4Q8WVI0 DUX4L28-201ENST00000623687 678 ntBASIC20.18■□□□□ 0.82
SMIM4Q8WVI0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM4Q8WVI0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM4Q8WVI0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM4Q8WVI0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM4Q8WVI0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM4Q8WVI0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM4Q8WVI0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM4Q8WVI0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM4Q8WVI0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.16■□□□□ 0.82
SMIM4Q8WVI0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM4Q8WVI0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM4Q8WVI0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SMIM4Q8WVI0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.16■□□□□ 0.82
SMIM4Q8WVI0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.15■□□□□ 0.82
SMIM4Q8WVI0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM4Q8WVI0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SMIM4Q8WVI0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM4Q8WVI0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.15■□□□□ 0.82
SMIM4Q8WVI0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SMIM4Q8WVI0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.15■□□□□ 0.82
SMIM4Q8WVI0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM4Q8WVI0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SMIM4Q8WVI0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMIM4Q8WVI0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM4Q8WVI0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM4Q8WVI0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM4Q8WVI0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM4Q8WVI0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM4Q8WVI0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.14■□□□□ 0.81
SMIM4Q8WVI0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.14■□□□□ 0.81
SMIM4Q8WVI0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SMIM4Q8WVI0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SMIM4Q8WVI0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SMIM4Q8WVI0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.13■□□□□ 0.81
SMIM4Q8WVI0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.13■□□□□ 0.81
SMIM4Q8WVI0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.13■□□□□ 0.81
SMIM4Q8WVI0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM4Q8WVI0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SMIM4Q8WVI0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.13■□□□□ 0.81
SMIM4Q8WVI0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SMIM4Q8WVI0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM4Q8WVI0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM4Q8WVI0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SMIM4Q8WVI0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.12■□□□□ 0.81
SMIM4Q8WVI0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.12■□□□□ 0.81
SMIM4Q8WVI0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM4Q8WVI0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.12■□□□□ 0.81
SMIM4Q8WVI0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 AL359504.2-201ENST00000605506 1601 ntBASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SMIM4Q8WVI0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.1■□□□□ 0.81
SMIM4Q8WVI0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM4Q8WVI0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMIM4Q8WVI0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM4Q8WVI0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SMIM4Q8WVI0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.1■□□□□ 0.81
SMIM4Q8WVI0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM4Q8WVI0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
SMIM4Q8WVI0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM4Q8WVI0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.09■□□□□ 0.81
SMIM4Q8WVI0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM4Q8WVI0 MIR6089-201ENST00000616698 64 ntBASIC20.09■□□□□ 0.81
SMIM4Q8WVI0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SMIM4Q8WVI0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.09■□□□□ 0.81
SMIM4Q8WVI0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMIM4Q8WVI0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMIM4Q8WVI0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.08■□□□□ 0.81
SMIM4Q8WVI0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.08■□□□□ 0.81
SMIM4Q8WVI0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMIM4Q8WVI0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SMIM4Q8WVI0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMIM4Q8WVI0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SMIM4Q8WVI0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM4Q8WVI0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
SMIM4Q8WVI0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.07■□□□□ 0.8
SMIM4Q8WVI0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.07■□□□□ 0.8
SMIM4Q8WVI0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM4Q8WVI0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.07■□□□□ 0.8
SMIM4Q8WVI0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM4Q8WVI0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM4Q8WVI0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SMIM4Q8WVI0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM4Q8WVI0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM4Q8WVI0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms