Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC022616.5-201ENST00000518796 181 ntBASIC24.78■■□□□ 1.56
RNF139Q8WU17 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF139Q8WU17 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.78■■□□□ 1.56
RNF139Q8WU17 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF139Q8WU17 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF139Q8WU17 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF139Q8WU17 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF139Q8WU17 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
RNF139Q8WU17 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
RNF139Q8WU17 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF139Q8WU17 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF139Q8WU17 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.77■■□□□ 1.56
RNF139Q8WU17 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.76■■□□□ 1.55
RNF139Q8WU17 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.76■■□□□ 1.55
RNF139Q8WU17 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF139Q8WU17 AL592295.1-201ENST00000400984 884 ntBASIC24.76■■□□□ 1.55
RNF139Q8WU17 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF139Q8WU17 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF139Q8WU17 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RNF139Q8WU17 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.75■■□□□ 1.55
RNF139Q8WU17 AC020928.2-201ENST00000588717 2197 ntBASIC24.75■■□□□ 1.55
RNF139Q8WU17 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF139Q8WU17 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF139Q8WU17 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RNF139Q8WU17 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF139Q8WU17 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF139Q8WU17 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.74■■□□□ 1.55
RNF139Q8WU17 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RNF139Q8WU17 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF139Q8WU17 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF139Q8WU17 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF139Q8WU17 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RNF139Q8WU17 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.73■■□□□ 1.55
RNF139Q8WU17 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.73■■□□□ 1.55
RNF139Q8WU17 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF139Q8WU17 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF139Q8WU17 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RNF139Q8WU17 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
RNF139Q8WU17 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RNF139Q8WU17 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.71■■□□□ 1.55
RNF139Q8WU17 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
RNF139Q8WU17 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RNF139Q8WU17 AC103724.3-201ENST00000564481 992 ntBASIC24.71■■□□□ 1.55
RNF139Q8WU17 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.71■■□□□ 1.55
RNF139Q8WU17 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
RNF139Q8WU17 FOXO3B-201ENST00000395675 1928 ntBASIC24.71■■□□□ 1.55
RNF139Q8WU17 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RNF139Q8WU17 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
RNF139Q8WU17 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
RNF139Q8WU17 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RNF139Q8WU17 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.7■■□□□ 1.54
RNF139Q8WU17 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF139Q8WU17 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RNF139Q8WU17 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.69■■□□□ 1.54
RNF139Q8WU17 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF139Q8WU17 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.69■■□□□ 1.54
RNF139Q8WU17 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF139Q8WU17 AL031848.2-201ENST00000607670 837 ntBASIC24.69■■□□□ 1.54
RNF139Q8WU17 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.69■■□□□ 1.54
RNF139Q8WU17 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF139Q8WU17 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF139Q8WU17 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF139Q8WU17 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
RNF139Q8WU17 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF139Q8WU17 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
RNF139Q8WU17 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.68■■□□□ 1.54
RNF139Q8WU17 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF139Q8WU17 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RNF139Q8WU17 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF139Q8WU17 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.67■■□□□ 1.54
RNF139Q8WU17 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
RNF139Q8WU17 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF139Q8WU17 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
RNF139Q8WU17 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RNF139Q8WU17 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.67■■□□□ 1.54
RNF139Q8WU17 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF139Q8WU17 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF139Q8WU17 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF139Q8WU17 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RNF139Q8WU17 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RNF139Q8WU17 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.66■■□□□ 1.54
RNF139Q8WU17 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RNF139Q8WU17 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF139Q8WU17 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF139Q8WU17 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF139Q8WU17 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF139Q8WU17 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF139Q8WU17 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
RNF139Q8WU17 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.65■■□□□ 1.54
RNF139Q8WU17 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF139Q8WU17 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.64■■□□□ 1.54
RNF139Q8WU17 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF139Q8WU17 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF139Q8WU17 THA1P-201ENST00000590384 1145 ntBASIC24.64■■□□□ 1.54
RNF139Q8WU17 AL451085.2-201ENST00000605085 799 ntBASIC24.64■■□□□ 1.54
RNF139Q8WU17 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF139Q8WU17 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.64■■□□□ 1.53
RNF139Q8WU17 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF139Q8WU17 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.64■■□□□ 1.53
RNF139Q8WU17 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms