Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.62■■□□□ 1.53
SH3RF2Q8TEC5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.62■■□□□ 1.53
SH3RF2Q8TEC5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SH3RF2Q8TEC5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SH3RF2Q8TEC5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SH3RF2Q8TEC5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SH3RF2Q8TEC5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SH3RF2Q8TEC5 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.61■■□□□ 1.53
SH3RF2Q8TEC5 MIR4281-201ENST00000580852 62 ntBASIC24.61■■□□□ 1.53
SH3RF2Q8TEC5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.61■■□□□ 1.53
SH3RF2Q8TEC5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SH3RF2Q8TEC5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SH3RF2Q8TEC5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
SH3RF2Q8TEC5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF2Q8TEC5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF2Q8TEC5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF2Q8TEC5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SH3RF2Q8TEC5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF2Q8TEC5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.59■■□□□ 1.53
SH3RF2Q8TEC5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.59■■□□□ 1.53
SH3RF2Q8TEC5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF2Q8TEC5 AC021242.3-201ENST00000607598 1377 ntBASIC24.58■■□□□ 1.53
SH3RF2Q8TEC5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SH3RF2Q8TEC5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.58■■□□□ 1.53
SH3RF2Q8TEC5 UNC93B8-201ENST00000511903 705 ntBASIC24.58■■□□□ 1.53
SH3RF2Q8TEC5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.58■■□□□ 1.53
SH3RF2Q8TEC5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SH3RF2Q8TEC5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SH3RF2Q8TEC5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.58■■□□□ 1.52
SH3RF2Q8TEC5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SH3RF2Q8TEC5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.57■■□□□ 1.52
SH3RF2Q8TEC5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
SH3RF2Q8TEC5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.57■■□□□ 1.52
SH3RF2Q8TEC5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.57■■□□□ 1.52
SH3RF2Q8TEC5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SH3RF2Q8TEC5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.57■■□□□ 1.52
SH3RF2Q8TEC5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF2Q8TEC5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF2Q8TEC5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF2Q8TEC5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF2Q8TEC5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.56■■□□□ 1.52
SH3RF2Q8TEC5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF2Q8TEC5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.56■■□□□ 1.52
SH3RF2Q8TEC5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF2Q8TEC5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.55■■□□□ 1.52
SH3RF2Q8TEC5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.55■■□□□ 1.52
SH3RF2Q8TEC5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.55■■□□□ 1.52
SH3RF2Q8TEC5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SH3RF2Q8TEC5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SH3RF2Q8TEC5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.55■■□□□ 1.52
SH3RF2Q8TEC5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SH3RF2Q8TEC5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SH3RF2Q8TEC5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SH3RF2Q8TEC5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SH3RF2Q8TEC5 TSPY9P-201ENST00000440215 945 ntBASIC24.54■■□□□ 1.52
SH3RF2Q8TEC5 TSPY11P-201ENST00000442607 1045 ntBASIC24.54■■□□□ 1.52
SH3RF2Q8TEC5 AC011551.1-201ENST00000614101 683 ntBASIC24.54■■□□□ 1.52
SH3RF2Q8TEC5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SH3RF2Q8TEC5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.54■■□□□ 1.52
SH3RF2Q8TEC5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SH3RF2Q8TEC5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SH3RF2Q8TEC5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SH3RF2Q8TEC5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SH3RF2Q8TEC5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.53■■□□□ 1.52
SH3RF2Q8TEC5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.53■■□□□ 1.52
SH3RF2Q8TEC5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.53■■□□□ 1.52
SH3RF2Q8TEC5 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.53■■□□□ 1.52
SH3RF2Q8TEC5 ERN1-208ENST00000606895 2068 ntBASIC24.53■■□□□ 1.52
SH3RF2Q8TEC5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SH3RF2Q8TEC5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SH3RF2Q8TEC5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SH3RF2Q8TEC5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SH3RF2Q8TEC5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SH3RF2Q8TEC5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SH3RF2Q8TEC5 KRT16P3-201ENST00000439127 1283 ntBASIC24.52■■□□□ 1.52
SH3RF2Q8TEC5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.52■■□□□ 1.52
SH3RF2Q8TEC5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SH3RF2Q8TEC5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SH3RF2Q8TEC5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.51■■□□□ 1.51
SH3RF2Q8TEC5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.51■■□□□ 1.51
SH3RF2Q8TEC5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.51■■□□□ 1.51
SH3RF2Q8TEC5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.51■■□□□ 1.51
SH3RF2Q8TEC5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SH3RF2Q8TEC5 FOXO3B-201ENST00000395675 1928 ntBASIC24.51■■□□□ 1.51
SH3RF2Q8TEC5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.5■■□□□ 1.51
SH3RF2Q8TEC5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.5■■□□□ 1.51
SH3RF2Q8TEC5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.5■■□□□ 1.51
SH3RF2Q8TEC5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.5■■□□□ 1.51
SH3RF2Q8TEC5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.5■■□□□ 1.51
SH3RF2Q8TEC5 AC092028.1-203ENST00000608262 953 ntBASIC24.5■■□□□ 1.51
SH3RF2Q8TEC5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SH3RF2Q8TEC5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SH3RF2Q8TEC5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SH3RF2Q8TEC5 AC096887.2-201ENST00000623443 1957 ntBASIC24.49■■□□□ 1.51
SH3RF2Q8TEC5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SH3RF2Q8TEC5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SH3RF2Q8TEC5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.49■■□□□ 1.51
SH3RF2Q8TEC5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.49■■□□□ 1.51
SH3RF2Q8TEC5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SH3RF2Q8TEC5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms