Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.21■■□□□ 1.31
HMGCLL1Q8TB92 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCLL1Q8TB92 AC004987.1-201ENST00000428627 508 ntBASIC23.2■■□□□ 1.3
HMGCLL1Q8TB92 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCLL1Q8TB92 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCLL1Q8TB92 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCLL1Q8TB92 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCLL1Q8TB92 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
HMGCLL1Q8TB92 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.19■■□□□ 1.3
HMGCLL1Q8TB92 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCLL1Q8TB92 TSPY13P-201ENST00000338964 914 ntBASIC23.18■■□□□ 1.3
HMGCLL1Q8TB92 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCLL1Q8TB92 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCLL1Q8TB92 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCLL1Q8TB92 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HMGCLL1Q8TB92 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLL1Q8TB92 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLL1Q8TB92 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
HMGCLL1Q8TB92 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
HMGCLL1Q8TB92 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.16■■□□□ 1.3
HMGCLL1Q8TB92 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.16■■□□□ 1.3
HMGCLL1Q8TB92 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLL1Q8TB92 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLL1Q8TB92 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
HMGCLL1Q8TB92 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.15■■□□□ 1.3
HMGCLL1Q8TB92 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HMGCLL1Q8TB92 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HMGCLL1Q8TB92 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.15■■□□□ 1.3
HMGCLL1Q8TB92 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HMGCLL1Q8TB92 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.15■■□□□ 1.3
HMGCLL1Q8TB92 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
HMGCLL1Q8TB92 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
HMGCLL1Q8TB92 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
HMGCLL1Q8TB92 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.14■■□□□ 1.3
HMGCLL1Q8TB92 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
HMGCLL1Q8TB92 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
HMGCLL1Q8TB92 RPS2P7-201ENST00000447334 885 ntBASIC23.14■■□□□ 1.29
HMGCLL1Q8TB92 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.14■■□□□ 1.29
HMGCLL1Q8TB92 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.14■■□□□ 1.29
HMGCLL1Q8TB92 AC087393.1-201ENST00000582896 145 ntBASIC23.14■■□□□ 1.29
HMGCLL1Q8TB92 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.14■■□□□ 1.29
HMGCLL1Q8TB92 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLL1Q8TB92 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLL1Q8TB92 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.13■■□□□ 1.29
HMGCLL1Q8TB92 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLL1Q8TB92 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.13■■□□□ 1.29
HMGCLL1Q8TB92 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
HMGCLL1Q8TB92 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLL1Q8TB92 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLL1Q8TB92 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLL1Q8TB92 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLL1Q8TB92 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLL1Q8TB92 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLL1Q8TB92 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLL1Q8TB92 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLL1Q8TB92 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.12■■□□□ 1.29
HMGCLL1Q8TB92 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.12■■□□□ 1.29
HMGCLL1Q8TB92 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
HMGCLL1Q8TB92 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCLL1Q8TB92 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.11■■□□□ 1.29
HMGCLL1Q8TB92 DUX4L18-201ENST00000553347 1267 ntBASIC23.11■■□□□ 1.29
HMGCLL1Q8TB92 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCLL1Q8TB92 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCLL1Q8TB92 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
HMGCLL1Q8TB92 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLL1Q8TB92 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLL1Q8TB92 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLL1Q8TB92 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLL1Q8TB92 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLL1Q8TB92 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.1■■□□□ 1.29
HMGCLL1Q8TB92 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.1■■□□□ 1.29
HMGCLL1Q8TB92 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCLL1Q8TB92 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCLL1Q8TB92 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCLL1Q8TB92 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.09■■□□□ 1.29
HMGCLL1Q8TB92 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.09■■□□□ 1.29
HMGCLL1Q8TB92 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCLL1Q8TB92 AL033527.3-201ENST00000566366 1196 ntBASIC23.09■■□□□ 1.29
HMGCLL1Q8TB92 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
HMGCLL1Q8TB92 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
HMGCLL1Q8TB92 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCLL1Q8TB92 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLL1Q8TB92 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLL1Q8TB92 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.08■■□□□ 1.29
HMGCLL1Q8TB92 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLL1Q8TB92 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLL1Q8TB92 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.08■■□□□ 1.29
HMGCLL1Q8TB92 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLL1Q8TB92 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms