Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP35Q8NFH5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.62■□□□□ 0.41
NUP35Q8NFH5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP35Q8NFH5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUP35Q8NFH5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NUP35Q8NFH5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NUP35Q8NFH5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP35Q8NFH5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NUP35Q8NFH5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP35Q8NFH5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUP35Q8NFH5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUP35Q8NFH5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUP35Q8NFH5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.61■□□□□ 0.41
NUP35Q8NFH5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NUP35Q8NFH5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUP35Q8NFH5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.6■□□□□ 0.41
NUP35Q8NFH5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NUP35Q8NFH5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.59■□□□□ 0.41
NUP35Q8NFH5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP35Q8NFH5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP35Q8NFH5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
NUP35Q8NFH5 AC005559.1-201ENST00000589661 871 ntBASIC17.59■□□□□ 0.41
NUP35Q8NFH5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NUP35Q8NFH5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NUP35Q8NFH5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
NUP35Q8NFH5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NUP35Q8NFH5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NUP35Q8NFH5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NUP35Q8NFH5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NUP35Q8NFH5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.58■□□□□ 0.4
NUP35Q8NFH5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.58■□□□□ 0.4
NUP35Q8NFH5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NUP35Q8NFH5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NUP35Q8NFH5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP35Q8NFH5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NUP35Q8NFH5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUP35Q8NFH5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
NUP35Q8NFH5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP35Q8NFH5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.57■□□□□ 0.4
NUP35Q8NFH5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUP35Q8NFH5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.57■□□□□ 0.4
NUP35Q8NFH5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUP35Q8NFH5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
NUP35Q8NFH5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP35Q8NFH5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP35Q8NFH5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP35Q8NFH5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.56■□□□□ 0.4
NUP35Q8NFH5 AC136428.2-201ENST00000563187 214 ntBASIC17.56■□□□□ 0.4
NUP35Q8NFH5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.55■□□□□ 0.4
NUP35Q8NFH5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP35Q8NFH5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NUP35Q8NFH5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NUP35Q8NFH5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP35Q8NFH5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.55■□□□□ 0.4
NUP35Q8NFH5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NUP35Q8NFH5 LINC00565-201ENST00000562710 2331 ntBASIC17.54■□□□□ 0.4
NUP35Q8NFH5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.54■□□□□ 0.4
NUP35Q8NFH5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.54■□□□□ 0.4
NUP35Q8NFH5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NUP35Q8NFH5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP35Q8NFH5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.54■□□□□ 0.4
NUP35Q8NFH5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP35Q8NFH5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.54■□□□□ 0.4
NUP35Q8NFH5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP35Q8NFH5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.53■□□□□ 0.4
NUP35Q8NFH5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.53■□□□□ 0.4
NUP35Q8NFH5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.53■□□□□ 0.4
NUP35Q8NFH5 EP400NL-214ENST00000641289 2402 ntBASIC17.53■□□□□ 0.4
NUP35Q8NFH5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.53■□□□□ 0.4
NUP35Q8NFH5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NUP35Q8NFH5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
NUP35Q8NFH5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUP35Q8NFH5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.52■□□□□ 0.4
NUP35Q8NFH5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUP35Q8NFH5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUP35Q8NFH5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUP35Q8NFH5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NUP35Q8NFH5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUP35Q8NFH5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUP35Q8NFH5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUP35Q8NFH5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NUP35Q8NFH5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUP35Q8NFH5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUP35Q8NFH5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.52■□□□□ 0.39
NUP35Q8NFH5 AC233723.2-201ENST00000623798 2106 ntBASIC17.51■□□□□ 0.39
NUP35Q8NFH5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP35Q8NFH5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP35Q8NFH5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP35Q8NFH5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms