Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
CFAP43Q8NDM7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
CFAP43Q8NDM7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC37.55■■■■□ 3.6
CFAP43Q8NDM7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
CFAP43Q8NDM7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC37.55■■■■□ 3.6
CFAP43Q8NDM7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
CFAP43Q8NDM7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC37.55■■■■□ 3.6
CFAP43Q8NDM7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC37.54■■■■□ 3.6
CFAP43Q8NDM7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC37.54■■■■□ 3.6
CFAP43Q8NDM7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC37.54■■■■□ 3.6
CFAP43Q8NDM7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
CFAP43Q8NDM7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC37.54■■■■□ 3.6
CFAP43Q8NDM7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC37.53■■■■□ 3.6
CFAP43Q8NDM7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
CFAP43Q8NDM7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC37.53■■■■□ 3.6
CFAP43Q8NDM7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC37.53■■■■□ 3.6
CFAP43Q8NDM7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC37.53■■■■□ 3.6
CFAP43Q8NDM7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
CFAP43Q8NDM7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC37.52■■■■□ 3.6
CFAP43Q8NDM7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
CFAP43Q8NDM7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
CFAP43Q8NDM7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC37.51■■■■□ 3.6
CFAP43Q8NDM7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
CFAP43Q8NDM7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC37.51■■■■□ 3.59
CFAP43Q8NDM7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC37.5■■■■□ 3.59
CFAP43Q8NDM7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC37.5■■■■□ 3.59
CFAP43Q8NDM7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC37.5■■■■□ 3.59
CFAP43Q8NDM7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC37.5■■■■□ 3.59
CFAP43Q8NDM7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
CFAP43Q8NDM7 AC104564.3-201ENST00000582367 638 ntBASIC37.5■■■■□ 3.59
CFAP43Q8NDM7 MTDHP2-201ENST00000601468 714 ntBASIC37.5■■■■□ 3.59
CFAP43Q8NDM7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC37.5■■■■□ 3.59
CFAP43Q8NDM7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC37.5■■■■□ 3.59
CFAP43Q8NDM7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
CFAP43Q8NDM7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC37.49■■■■□ 3.59
CFAP43Q8NDM7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC37.48■■■■□ 3.59
CFAP43Q8NDM7 AC092666.2-201ENST00000613287 246 ntBASIC37.48■■■■□ 3.59
CFAP43Q8NDM7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC37.48■■■■□ 3.59
CFAP43Q8NDM7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC37.48■■■■□ 3.59
CFAP43Q8NDM7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
CFAP43Q8NDM7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC37.48■■■■□ 3.59
CFAP43Q8NDM7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC37.47■■■■□ 3.59
CFAP43Q8NDM7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC37.47■■■■□ 3.59
CFAP43Q8NDM7 AC010997.5-201ENST00000609182 354 ntBASIC37.47■■■■□ 3.59
CFAP43Q8NDM7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC37.47■■■■□ 3.59
CFAP43Q8NDM7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
CFAP43Q8NDM7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC37.46■■■■□ 3.59
CFAP43Q8NDM7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC37.44■■■■□ 3.58
CFAP43Q8NDM7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
CFAP43Q8NDM7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC37.44■■■■□ 3.58
CFAP43Q8NDM7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC37.44■■■■□ 3.58
CFAP43Q8NDM7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC37.44■■■■□ 3.58
CFAP43Q8NDM7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
CFAP43Q8NDM7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC37.43■■■■□ 3.58
CFAP43Q8NDM7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC37.43■■■■□ 3.58
CFAP43Q8NDM7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC37.42■■■■□ 3.58
CFAP43Q8NDM7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC37.42■■■■□ 3.58
CFAP43Q8NDM7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC37.42■■■■□ 3.58
CFAP43Q8NDM7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC37.42■■■■□ 3.58
CFAP43Q8NDM7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
CFAP43Q8NDM7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
CFAP43Q8NDM7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC37.42■■■■□ 3.58
CFAP43Q8NDM7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC37.42■■■■□ 3.58
CFAP43Q8NDM7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC37.41■■■■□ 3.58
CFAP43Q8NDM7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC37.41■■■■□ 3.58
CFAP43Q8NDM7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
CFAP43Q8NDM7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC37.41■■■■□ 3.58
CFAP43Q8NDM7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC37.4■■■■□ 3.58
CFAP43Q8NDM7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
CFAP43Q8NDM7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC37.39■■■■□ 3.58
CFAP43Q8NDM7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
CFAP43Q8NDM7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC37.39■■■■□ 3.58
CFAP43Q8NDM7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC37.39■■■■□ 3.58
CFAP43Q8NDM7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
CFAP43Q8NDM7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC37.38■■■■□ 3.58
CFAP43Q8NDM7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC37.38■■■■□ 3.57
CFAP43Q8NDM7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC37.38■■■■□ 3.57
CFAP43Q8NDM7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC37.38■■■■□ 3.57
CFAP43Q8NDM7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC37.38■■■■□ 3.57
CFAP43Q8NDM7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
CFAP43Q8NDM7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC37.37■■■■□ 3.57
CFAP43Q8NDM7 RASSF1-AS1-201ENST00000629828 790 ntBASIC37.37■■■■□ 3.57
CFAP43Q8NDM7 AC135279.3-201ENST00000610945 1311 ntBASIC37.36■■■■□ 3.57
CFAP43Q8NDM7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
CFAP43Q8NDM7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
CFAP43Q8NDM7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC37.36■■■■□ 3.57
CFAP43Q8NDM7 AL356740.2-201ENST00000601559 647 ntBASIC37.35■■■■□ 3.57
CFAP43Q8NDM7 AC106739.1-201ENST00000617035 715 ntBASIC37.35■■■■□ 3.57
CFAP43Q8NDM7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC37.34■■■■□ 3.57
CFAP43Q8NDM7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC37.34■■■■□ 3.57
CFAP43Q8NDM7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC37.34■■■■□ 3.57
CFAP43Q8NDM7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC37.34■■■■□ 3.57
CFAP43Q8NDM7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC37.34■■■■□ 3.57
CFAP43Q8NDM7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC37.33■■■■□ 3.57
CFAP43Q8NDM7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CFAP43Q8NDM7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CFAP43Q8NDM7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
CFAP43Q8NDM7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC37.33■■■■□ 3.57
CFAP43Q8NDM7 AC096887.2-201ENST00000623443 1957 ntBASIC37.32■■■■□ 3.57
CFAP43Q8NDM7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC37.32■■■■□ 3.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms