Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
EXD3Q8N9H8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
EXD3Q8N9H8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
EXD3Q8N9H8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.28■■□□□ 1.16
EXD3Q8N9H8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.28■■□□□ 1.16
EXD3Q8N9H8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.28■■□□□ 1.16
EXD3Q8N9H8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
EXD3Q8N9H8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
EXD3Q8N9H8 AL117332.1-201ENST00000622628 974 ntBASIC22.28■■□□□ 1.16
EXD3Q8N9H8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
EXD3Q8N9H8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.28■■□□□ 1.16
EXD3Q8N9H8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.28■■□□□ 1.16
EXD3Q8N9H8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
EXD3Q8N9H8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.27■■□□□ 1.16
EXD3Q8N9H8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.27■■□□□ 1.16
EXD3Q8N9H8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
EXD3Q8N9H8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.27■■□□□ 1.16
EXD3Q8N9H8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
EXD3Q8N9H8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.26■■□□□ 1.15
EXD3Q8N9H8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.26■■□□□ 1.15
EXD3Q8N9H8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.26■■□□□ 1.15
EXD3Q8N9H8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
EXD3Q8N9H8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.26■■□□□ 1.15
EXD3Q8N9H8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
EXD3Q8N9H8 AC120024.1-201ENST00000562672 995 ntBASIC22.26■■□□□ 1.15
EXD3Q8N9H8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
EXD3Q8N9H8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
EXD3Q8N9H8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
EXD3Q8N9H8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
EXD3Q8N9H8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
EXD3Q8N9H8 MIR3621-201ENST00000580529 85 ntBASIC22.25■■□□□ 1.15
EXD3Q8N9H8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
EXD3Q8N9H8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
EXD3Q8N9H8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.25■■□□□ 1.15
EXD3Q8N9H8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
EXD3Q8N9H8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
EXD3Q8N9H8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
EXD3Q8N9H8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.24■■□□□ 1.15
EXD3Q8N9H8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EXD3Q8N9H8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EXD3Q8N9H8 AC133561.4-201ENST00000566112 224 ntBASIC22.23■■□□□ 1.15
EXD3Q8N9H8 RARRES2P6-201ENST00000567333 442 ntBASIC22.23■■□□□ 1.15
EXD3Q8N9H8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
EXD3Q8N9H8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EXD3Q8N9H8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
EXD3Q8N9H8 AC091060.1-201ENST00000623524 1766 ntBASIC22.22■■□□□ 1.15
EXD3Q8N9H8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.22■■□□□ 1.15
EXD3Q8N9H8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.22■■□□□ 1.15
EXD3Q8N9H8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
EXD3Q8N9H8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.22■■□□□ 1.15
EXD3Q8N9H8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.22■■□□□ 1.15
EXD3Q8N9H8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.22■■□□□ 1.15
EXD3Q8N9H8 MIR4466-201ENST00000606121 54 ntBASIC22.22■■□□□ 1.15
EXD3Q8N9H8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
EXD3Q8N9H8 ZNRF2P3-201ENST00000424200 374 ntBASIC22.21■■□□□ 1.15
EXD3Q8N9H8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
EXD3Q8N9H8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.21■■□□□ 1.15
EXD3Q8N9H8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
EXD3Q8N9H8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
EXD3Q8N9H8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.2■■□□□ 1.14
EXD3Q8N9H8 AC010997.5-201ENST00000609182 354 ntBASIC22.2■■□□□ 1.14
EXD3Q8N9H8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
EXD3Q8N9H8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.2■■□□□ 1.14
EXD3Q8N9H8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.2■■□□□ 1.14
EXD3Q8N9H8 AL449106.1-201ENST00000608517 1980 ntBASIC22.19■■□□□ 1.14
EXD3Q8N9H8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.19■■□□□ 1.14
EXD3Q8N9H8 KRT18P10-201ENST00000388836 1287 ntBASIC22.19■■□□□ 1.14
EXD3Q8N9H8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.19■■□□□ 1.14
EXD3Q8N9H8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.19■■□□□ 1.14
EXD3Q8N9H8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
EXD3Q8N9H8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
EXD3Q8N9H8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
EXD3Q8N9H8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
EXD3Q8N9H8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
EXD3Q8N9H8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
EXD3Q8N9H8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
EXD3Q8N9H8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
EXD3Q8N9H8 MIR6724-1-201ENST00000616420 92 ntBASIC22.18■■□□□ 1.14
EXD3Q8N9H8 MIR6724-2-201ENST00000616483 92 ntBASIC22.18■■□□□ 1.14
EXD3Q8N9H8 MIR6724-4-201ENST00000617390 92 ntBASIC22.18■■□□□ 1.14
EXD3Q8N9H8 MIR6724-3-201ENST00000622482 92 ntBASIC22.18■■□□□ 1.14
EXD3Q8N9H8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
EXD3Q8N9H8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
EXD3Q8N9H8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
EXD3Q8N9H8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
EXD3Q8N9H8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.17■■□□□ 1.14
EXD3Q8N9H8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
EXD3Q8N9H8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
EXD3Q8N9H8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.16■■□□□ 1.14
EXD3Q8N9H8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.16■■□□□ 1.14
EXD3Q8N9H8 AL356740.2-201ENST00000601559 647 ntBASIC22.16■■□□□ 1.14
EXD3Q8N9H8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
EXD3Q8N9H8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
EXD3Q8N9H8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.15■■□□□ 1.14
EXD3Q8N9H8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.15■■□□□ 1.14
EXD3Q8N9H8 AC026271.2-201ENST00000428091 497 ntBASIC22.15■■□□□ 1.14
EXD3Q8N9H8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.15■■□□□ 1.14
EXD3Q8N9H8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.14■■□□□ 1.14
EXD3Q8N9H8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EXD3Q8N9H8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms