Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CNEP1R1Q8N9A8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CNEP1R1Q8N9A8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.98■□□□□ 0.95
CNEP1R1Q8N9A8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.98■□□□□ 0.95
CNEP1R1Q8N9A8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.98■□□□□ 0.95
CNEP1R1Q8N9A8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNEP1R1Q8N9A8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNEP1R1Q8N9A8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNEP1R1Q8N9A8 AC010501.1-201ENST00000606270 1962 ntBASIC20.97■□□□□ 0.95
CNEP1R1Q8N9A8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNEP1R1Q8N9A8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CNEP1R1Q8N9A8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNEP1R1Q8N9A8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.97■□□□□ 0.95
CNEP1R1Q8N9A8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 AC097639.1-201ENST00000565519 1891 ntBASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 FOXO3B-201ENST00000395675 1928 ntBASIC20.96■□□□□ 0.95
CNEP1R1Q8N9A8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNEP1R1Q8N9A8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CNEP1R1Q8N9A8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.95■□□□□ 0.94
CNEP1R1Q8N9A8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CNEP1R1Q8N9A8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNEP1R1Q8N9A8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 MIR4787-201ENST00000607364 84 ntBASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNEP1R1Q8N9A8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNEP1R1Q8N9A8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNEP1R1Q8N9A8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNEP1R1Q8N9A8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CNEP1R1Q8N9A8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.93■□□□□ 0.94
CNEP1R1Q8N9A8 AC131212.1-201ENST00000613771 668 ntBASIC20.93■□□□□ 0.94
CNEP1R1Q8N9A8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNEP1R1Q8N9A8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNEP1R1Q8N9A8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNEP1R1Q8N9A8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNEP1R1Q8N9A8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.92■□□□□ 0.94
CNEP1R1Q8N9A8 MIR4281-201ENST00000580852 62 ntBASIC20.92■□□□□ 0.94
CNEP1R1Q8N9A8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.92■□□□□ 0.94
CNEP1R1Q8N9A8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.92■□□□□ 0.94
CNEP1R1Q8N9A8 AC011551.1-201ENST00000614101 683 ntBASIC20.92■□□□□ 0.94
CNEP1R1Q8N9A8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNEP1R1Q8N9A8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNEP1R1Q8N9A8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNEP1R1Q8N9A8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNEP1R1Q8N9A8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.91■□□□□ 0.94
CNEP1R1Q8N9A8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNEP1R1Q8N9A8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
CNEP1R1Q8N9A8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.91■□□□□ 0.94
CNEP1R1Q8N9A8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
CNEP1R1Q8N9A8 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.91■□□□□ 0.94
CNEP1R1Q8N9A8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNEP1R1Q8N9A8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.9■□□□□ 0.94
CNEP1R1Q8N9A8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNEP1R1Q8N9A8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.9■□□□□ 0.94
CNEP1R1Q8N9A8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CNEP1R1Q8N9A8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.9■□□□□ 0.94
CNEP1R1Q8N9A8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.9■□□□□ 0.94
CNEP1R1Q8N9A8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNEP1R1Q8N9A8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.89■□□□□ 0.94
CNEP1R1Q8N9A8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CNEP1R1Q8N9A8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNEP1R1Q8N9A8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 AL356441.2-201ENST00000443009 864 ntBASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 AC137630.3-201ENST00000607245 391 ntBASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNEP1R1Q8N9A8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNEP1R1Q8N9A8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.88■□□□□ 0.93
CNEP1R1Q8N9A8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.88■□□□□ 0.93
CNEP1R1Q8N9A8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNEP1R1Q8N9A8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
CNEP1R1Q8N9A8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNEP1R1Q8N9A8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNEP1R1Q8N9A8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms