Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRAM1L1Q8N609 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.44■■□□□ 1.34
TRAM1L1Q8N609 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
TRAM1L1Q8N609 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRAM1L1Q8N609 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRAM1L1Q8N609 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRAM1L1Q8N609 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAM1L1Q8N609 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.43■■□□□ 1.34
TRAM1L1Q8N609 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.43■■□□□ 1.34
TRAM1L1Q8N609 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
TRAM1L1Q8N609 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAM1L1Q8N609 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAM1L1Q8N609 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAM1L1Q8N609 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAM1L1Q8N609 SLC6A10P-202ENST00000431994 2058 ntBASIC23.42■■□□□ 1.34
TRAM1L1Q8N609 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
TRAM1L1Q8N609 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAM1L1Q8N609 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.42■■□□□ 1.34
TRAM1L1Q8N609 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.42■■□□□ 1.34
TRAM1L1Q8N609 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
TRAM1L1Q8N609 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAM1L1Q8N609 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAM1L1Q8N609 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
TRAM1L1Q8N609 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAM1L1Q8N609 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAM1L1Q8N609 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAM1L1Q8N609 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.41■■□□□ 1.34
TRAM1L1Q8N609 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAM1L1Q8N609 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAM1L1Q8N609 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRAM1L1Q8N609 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAM1L1Q8N609 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAM1L1Q8N609 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.4■■□□□ 1.34
TRAM1L1Q8N609 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.4■■□□□ 1.34
TRAM1L1Q8N609 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.4■■□□□ 1.34
TRAM1L1Q8N609 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.4■■□□□ 1.34
TRAM1L1Q8N609 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAM1L1Q8N609 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.4■■□□□ 1.34
TRAM1L1Q8N609 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.4■■□□□ 1.34
TRAM1L1Q8N609 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TRAM1L1Q8N609 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.39■■□□□ 1.34
TRAM1L1Q8N609 AC103724.3-201ENST00000564481 992 ntBASIC23.39■■□□□ 1.33
TRAM1L1Q8N609 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRAM1L1Q8N609 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.39■■□□□ 1.33
TRAM1L1Q8N609 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRAM1L1Q8N609 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRAM1L1Q8N609 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRAM1L1Q8N609 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRAM1L1Q8N609 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.38■■□□□ 1.33
TRAM1L1Q8N609 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.38■■□□□ 1.33
TRAM1L1Q8N609 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
TRAM1L1Q8N609 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRAM1L1Q8N609 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRAM1L1Q8N609 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.38■■□□□ 1.33
TRAM1L1Q8N609 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAM1L1Q8N609 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRAM1L1Q8N609 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.37■■□□□ 1.33
TRAM1L1Q8N609 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TRAM1L1Q8N609 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAM1L1Q8N609 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAM1L1Q8N609 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.37■■□□□ 1.33
TRAM1L1Q8N609 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRAM1L1Q8N609 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRAM1L1Q8N609 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRAM1L1Q8N609 KRT18P24-201ENST00000344739 1156 ntBASIC23.36■■□□□ 1.33
TRAM1L1Q8N609 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.36■■□□□ 1.33
TRAM1L1Q8N609 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.36■■□□□ 1.33
TRAM1L1Q8N609 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRAM1L1Q8N609 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRAM1L1Q8N609 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAM1L1Q8N609 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAM1L1Q8N609 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TRAM1L1Q8N609 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRAM1L1Q8N609 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRAM1L1Q8N609 AC011551.1-201ENST00000614101 683 ntBASIC23.35■■□□□ 1.33
TRAM1L1Q8N609 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.35■■□□□ 1.33
TRAM1L1Q8N609 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRAM1L1Q8N609 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRAM1L1Q8N609 AC120024.1-201ENST00000562672 995 ntBASIC23.34■■□□□ 1.33
TRAM1L1Q8N609 AL031848.2-201ENST00000607670 837 ntBASIC23.34■■□□□ 1.33
TRAM1L1Q8N609 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRAM1L1Q8N609 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRAM1L1Q8N609 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRAM1L1Q8N609 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.33■■□□□ 1.33
TRAM1L1Q8N609 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRAM1L1Q8N609 THA1P-201ENST00000590384 1145 ntBASIC23.33■■□□□ 1.33
TRAM1L1Q8N609 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRAM1L1Q8N609 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
TRAM1L1Q8N609 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.32■■□□□ 1.32
TRAM1L1Q8N609 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms