Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DHX40Q8IX18 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DHX40Q8IX18 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DHX40Q8IX18 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DHX40Q8IX18 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DHX40Q8IX18 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
DHX40Q8IX18 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
DHX40Q8IX18 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DHX40Q8IX18 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.31■■□□□ 1.8
DHX40Q8IX18 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DHX40Q8IX18 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DHX40Q8IX18 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.31■■□□□ 1.8
DHX40Q8IX18 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DHX40Q8IX18 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DHX40Q8IX18 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.3■■□□□ 1.8
DHX40Q8IX18 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.29■■□□□ 1.8
DHX40Q8IX18 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.29■■□□□ 1.8
DHX40Q8IX18 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.29■■□□□ 1.8
DHX40Q8IX18 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
DHX40Q8IX18 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
DHX40Q8IX18 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
DHX40Q8IX18 AC126177.7-201ENST00000547904 679 ntBASIC26.29■■□□□ 1.8
DHX40Q8IX18 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
DHX40Q8IX18 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
DHX40Q8IX18 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DHX40Q8IX18 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
DHX40Q8IX18 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DHX40Q8IX18 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DHX40Q8IX18 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DHX40Q8IX18 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DHX40Q8IX18 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DHX40Q8IX18 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DHX40Q8IX18 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DHX40Q8IX18 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DHX40Q8IX18 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DHX40Q8IX18 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
DHX40Q8IX18 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
DHX40Q8IX18 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
DHX40Q8IX18 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.27■■□□□ 1.8
DHX40Q8IX18 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DHX40Q8IX18 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DHX40Q8IX18 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
DHX40Q8IX18 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
DHX40Q8IX18 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DHX40Q8IX18 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DHX40Q8IX18 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.26■■□□□ 1.79
DHX40Q8IX18 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
DHX40Q8IX18 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
DHX40Q8IX18 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
DHX40Q8IX18 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DHX40Q8IX18 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.26■■□□□ 1.79
DHX40Q8IX18 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.25■■□□□ 1.79
DHX40Q8IX18 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DHX40Q8IX18 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DHX40Q8IX18 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.24■■□□□ 1.79
DHX40Q8IX18 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DHX40Q8IX18 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
DHX40Q8IX18 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.24■■□□□ 1.79
DHX40Q8IX18 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.24■■□□□ 1.79
DHX40Q8IX18 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DHX40Q8IX18 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.23■■□□□ 1.79
DHX40Q8IX18 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.23■■□□□ 1.79
DHX40Q8IX18 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DHX40Q8IX18 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.23■■□□□ 1.79
DHX40Q8IX18 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DHX40Q8IX18 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DHX40Q8IX18 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
DHX40Q8IX18 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.23■■□□□ 1.79
DHX40Q8IX18 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
DHX40Q8IX18 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DHX40Q8IX18 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
DHX40Q8IX18 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
DHX40Q8IX18 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DHX40Q8IX18 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DHX40Q8IX18 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DHX40Q8IX18 AL157400.5-201ENST00000507624 621 ntBASIC26.22■■□□□ 1.79
DHX40Q8IX18 MIR6089-201ENST00000616698 64 ntBASIC26.22■■□□□ 1.79
DHX40Q8IX18 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
DHX40Q8IX18 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.21■■□□□ 1.79
DHX40Q8IX18 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.21■■□□□ 1.79
DHX40Q8IX18 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DHX40Q8IX18 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DHX40Q8IX18 ABCB10P4-201ENST00000566803 2184 ntBASIC26.2■■□□□ 1.79
DHX40Q8IX18 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
DHX40Q8IX18 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
DHX40Q8IX18 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
DHX40Q8IX18 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.2■■□□□ 1.78
DHX40Q8IX18 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DHX40Q8IX18 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
DHX40Q8IX18 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
DHX40Q8IX18 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.19■■□□□ 1.78
DHX40Q8IX18 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.19■■□□□ 1.78
DHX40Q8IX18 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
DHX40Q8IX18 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
DHX40Q8IX18 AC025884.2-201ENST00000553429 711 ntBASIC26.19■■□□□ 1.78
DHX40Q8IX18 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DHX40Q8IX18 DUSP8P5-201ENST00000422884 1815 ntBASIC26.18■■□□□ 1.78
DHX40Q8IX18 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DHX40Q8IX18 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.18■■□□□ 1.78
DHX40Q8IX18 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms