Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 KRT18P10-201ENST00000388836 1287 ntBASIC25.05■■□□□ 1.6
RNF135Q8IUD6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.05■■□□□ 1.6
RNF135Q8IUD6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
RNF135Q8IUD6 AL356740.2-201ENST00000601559 647 ntBASIC25.05■■□□□ 1.6
RNF135Q8IUD6 MIR6724-1-201ENST00000616420 92 ntBASIC25.05■■□□□ 1.6
RNF135Q8IUD6 MIR6724-2-201ENST00000616483 92 ntBASIC25.05■■□□□ 1.6
RNF135Q8IUD6 MIR6724-4-201ENST00000617390 92 ntBASIC25.05■■□□□ 1.6
RNF135Q8IUD6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RNF135Q8IUD6 MIR6724-3-201ENST00000622482 92 ntBASIC25.05■■□□□ 1.6
RNF135Q8IUD6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RNF135Q8IUD6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RNF135Q8IUD6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF135Q8IUD6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.05■■□□□ 1.6
RNF135Q8IUD6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF135Q8IUD6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.04■■□□□ 1.6
RNF135Q8IUD6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF135Q8IUD6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.04■■□□□ 1.6
RNF135Q8IUD6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.04■■□□□ 1.6
RNF135Q8IUD6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF135Q8IUD6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF135Q8IUD6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RNF135Q8IUD6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RNF135Q8IUD6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF135Q8IUD6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF135Q8IUD6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF135Q8IUD6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF135Q8IUD6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF135Q8IUD6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF135Q8IUD6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RNF135Q8IUD6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.02■■□□□ 1.6
RNF135Q8IUD6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.02■■□□□ 1.6
RNF135Q8IUD6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF135Q8IUD6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF135Q8IUD6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF135Q8IUD6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF135Q8IUD6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF135Q8IUD6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF135Q8IUD6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25■■□□□ 1.59
RNF135Q8IUD6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF135Q8IUD6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF135Q8IUD6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF135Q8IUD6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.99■■□□□ 1.59
RNF135Q8IUD6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.99■■□□□ 1.59
RNF135Q8IUD6 MTDHP2-201ENST00000601468 714 ntBASIC24.98■■□□□ 1.59
RNF135Q8IUD6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF135Q8IUD6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.97■■□□□ 1.59
RNF135Q8IUD6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.97■■□□□ 1.59
RNF135Q8IUD6 MIR5787-201ENST00000611784 55 ntBASIC24.97■■□□□ 1.59
RNF135Q8IUD6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF135Q8IUD6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF135Q8IUD6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF135Q8IUD6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.96■■□□□ 1.59
RNF135Q8IUD6 AP004609.3-201ENST00000610705 1884 ntBASIC24.96■■□□□ 1.59
RNF135Q8IUD6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF135Q8IUD6 AC135279.3-201ENST00000610945 1311 ntBASIC24.96■■□□□ 1.59
RNF135Q8IUD6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
RNF135Q8IUD6 AC142381.2-201ENST00000566120 298 ntBASIC24.96■■□□□ 1.59
RNF135Q8IUD6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
RNF135Q8IUD6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF135Q8IUD6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF135Q8IUD6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.95■■□□□ 1.58
RNF135Q8IUD6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
RNF135Q8IUD6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.95■■□□□ 1.58
RNF135Q8IUD6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF135Q8IUD6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF135Q8IUD6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
RNF135Q8IUD6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RNF135Q8IUD6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
RNF135Q8IUD6 PBX2P1-201ENST00000493219 1291 ntBASIC24.94■■□□□ 1.58
RNF135Q8IUD6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.94■■□□□ 1.58
RNF135Q8IUD6 AL512631.2-201ENST00000604634 923 ntBASIC24.94■■□□□ 1.58
RNF135Q8IUD6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.94■■□□□ 1.58
RNF135Q8IUD6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.94■■□□□ 1.58
RNF135Q8IUD6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF135Q8IUD6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.94■■□□□ 1.58
RNF135Q8IUD6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.93■■□□□ 1.58
RNF135Q8IUD6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF135Q8IUD6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.93■■□□□ 1.58
RNF135Q8IUD6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.93■■□□□ 1.58
RNF135Q8IUD6 AC106739.1-201ENST00000617035 715 ntBASIC24.93■■□□□ 1.58
RNF135Q8IUD6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF135Q8IUD6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
RNF135Q8IUD6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF135Q8IUD6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF135Q8IUD6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF135Q8IUD6 MIR4281-201ENST00000580852 62 ntBASIC24.92■■□□□ 1.58
RNF135Q8IUD6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.92■■□□□ 1.58
RNF135Q8IUD6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.92■■□□□ 1.58
RNF135Q8IUD6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.92■■□□□ 1.58
RNF135Q8IUD6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF135Q8IUD6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.91■■□□□ 1.58
RNF135Q8IUD6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.91■■□□□ 1.58
RNF135Q8IUD6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.91■■□□□ 1.58
RNF135Q8IUD6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF135Q8IUD6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.91■■□□□ 1.58
RNF135Q8IUD6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RNF135Q8IUD6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.9■■□□□ 1.58
RNF135Q8IUD6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RNF135Q8IUD6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.9■■□□□ 1.58
RNF135Q8IUD6 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms