Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF44Q7L0R7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF44Q7L0R7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF44Q7L0R7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF44Q7L0R7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF44Q7L0R7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF44Q7L0R7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF44Q7L0R7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RNF44Q7L0R7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF44Q7L0R7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF44Q7L0R7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF44Q7L0R7 FOXO3B-201ENST00000395675 1928 ntBASIC22.63■■□□□ 1.21
RNF44Q7L0R7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF44Q7L0R7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF44Q7L0R7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.61■■□□□ 1.21
RNF44Q7L0R7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF44Q7L0R7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RNF44Q7L0R7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF44Q7L0R7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF44Q7L0R7 AC103724.3-201ENST00000564481 992 ntBASIC22.61■■□□□ 1.21
RNF44Q7L0R7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.61■■□□□ 1.21
RNF44Q7L0R7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF44Q7L0R7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF44Q7L0R7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF44Q7L0R7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF44Q7L0R7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RNF44Q7L0R7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF44Q7L0R7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RNF44Q7L0R7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF44Q7L0R7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF44Q7L0R7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RNF44Q7L0R7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF44Q7L0R7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF44Q7L0R7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RNF44Q7L0R7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.59■■□□□ 1.21
RNF44Q7L0R7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF44Q7L0R7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RNF44Q7L0R7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.58■■□□□ 1.21
RNF44Q7L0R7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.58■■□□□ 1.21
RNF44Q7L0R7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RNF44Q7L0R7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RNF44Q7L0R7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF44Q7L0R7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.57■■□□□ 1.2
RNF44Q7L0R7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF44Q7L0R7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF44Q7L0R7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF44Q7L0R7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF44Q7L0R7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF44Q7L0R7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RNF44Q7L0R7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF44Q7L0R7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF44Q7L0R7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF44Q7L0R7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF44Q7L0R7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF44Q7L0R7 AL031848.2-201ENST00000607670 837 ntBASIC22.56■■□□□ 1.2
RNF44Q7L0R7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF44Q7L0R7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RNF44Q7L0R7 AL451085.2-201ENST00000605085 799 ntBASIC22.55■■□□□ 1.2
RNF44Q7L0R7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF44Q7L0R7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF44Q7L0R7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF44Q7L0R7 KRT18P24-201ENST00000344739 1156 ntBASIC22.54■■□□□ 1.2
RNF44Q7L0R7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF44Q7L0R7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF44Q7L0R7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF44Q7L0R7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF44Q7L0R7 AC011551.1-201ENST00000614101 683 ntBASIC22.53■■□□□ 1.2
RNF44Q7L0R7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF44Q7L0R7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.53■■□□□ 1.2
RNF44Q7L0R7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF44Q7L0R7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF44Q7L0R7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.52■■□□□ 1.2
RNF44Q7L0R7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RNF44Q7L0R7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF44Q7L0R7 AC120024.1-201ENST00000562672 995 ntBASIC22.52■■□□□ 1.2
RNF44Q7L0R7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.52■■□□□ 1.2
RNF44Q7L0R7 THA1P-201ENST00000590384 1145 ntBASIC22.52■■□□□ 1.2
RNF44Q7L0R7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF44Q7L0R7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
RNF44Q7L0R7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RNF44Q7L0R7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF44Q7L0R7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF44Q7L0R7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF44Q7L0R7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF44Q7L0R7 SLC6A10P-202ENST00000431994 2058 ntBASIC22.5■■□□□ 1.19
RNF44Q7L0R7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.5■■□□□ 1.19
RNF44Q7L0R7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.5■■□□□ 1.19
RNF44Q7L0R7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF44Q7L0R7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms