Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
C9orf139Q6ZV77 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf139Q6ZV77 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.12■□□□□ 0.65
C9orf139Q6ZV77 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.12■□□□□ 0.65
C9orf139Q6ZV77 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.12■□□□□ 0.65
C9orf139Q6ZV77 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.12■□□□□ 0.65
C9orf139Q6ZV77 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf139Q6ZV77 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C9orf139Q6ZV77 AC008406.3-201ENST00000620001 1374 ntBASIC19.1■□□□□ 0.65
C9orf139Q6ZV77 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.1■□□□□ 0.65
C9orf139Q6ZV77 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.1■□□□□ 0.65
C9orf139Q6ZV77 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C9orf139Q6ZV77 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 TSPY9P-201ENST00000440215 945 ntBASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 TSPY11P-201ENST00000442607 1045 ntBASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
C9orf139Q6ZV77 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C9orf139Q6ZV77 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C9orf139Q6ZV77 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C9orf139Q6ZV77 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
C9orf139Q6ZV77 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C9orf139Q6ZV77 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
C9orf139Q6ZV77 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.08■□□□□ 0.64
C9orf139Q6ZV77 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C9orf139Q6ZV77 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C9orf139Q6ZV77 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.07■□□□□ 0.64
C9orf139Q6ZV77 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
C9orf139Q6ZV77 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.07■□□□□ 0.64
C9orf139Q6ZV77 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
C9orf139Q6ZV77 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C9orf139Q6ZV77 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
C9orf139Q6ZV77 AC019069.1-201ENST00000610008 1333 ntBASIC19.06■□□□□ 0.64
C9orf139Q6ZV77 FOXO3B-201ENST00000395675 1928 ntBASIC19.06■□□□□ 0.64
C9orf139Q6ZV77 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
C9orf139Q6ZV77 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.06■□□□□ 0.64
C9orf139Q6ZV77 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.06■□□□□ 0.64
C9orf139Q6ZV77 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.06■□□□□ 0.64
C9orf139Q6ZV77 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf139Q6ZV77 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.06■□□□□ 0.64
C9orf139Q6ZV77 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf139Q6ZV77 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
C9orf139Q6ZV77 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 AC010997.5-201ENST00000609182 354 ntBASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf139Q6ZV77 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf139Q6ZV77 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.02■□□□□ 0.64
C9orf139Q6ZV77 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms