Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
DCLRE1AQ6PJP8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.39■■□□□ 1.66
DCLRE1AQ6PJP8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
DCLRE1AQ6PJP8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
DCLRE1AQ6PJP8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.39■■□□□ 1.66
DCLRE1AQ6PJP8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
DCLRE1AQ6PJP8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DCLRE1AQ6PJP8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
DCLRE1AQ6PJP8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.39■■□□□ 1.65
DCLRE1AQ6PJP8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DCLRE1AQ6PJP8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
DCLRE1AQ6PJP8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
DCLRE1AQ6PJP8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.38■■□□□ 1.65
DCLRE1AQ6PJP8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
DCLRE1AQ6PJP8 AC021242.3-201ENST00000607598 1377 ntBASIC25.38■■□□□ 1.65
DCLRE1AQ6PJP8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
DCLRE1AQ6PJP8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.37■■□□□ 1.65
DCLRE1AQ6PJP8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DCLRE1AQ6PJP8 FOXO3B-201ENST00000395675 1928 ntBASIC25.37■■□□□ 1.65
DCLRE1AQ6PJP8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.37■■□□□ 1.65
DCLRE1AQ6PJP8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
DCLRE1AQ6PJP8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DCLRE1AQ6PJP8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.37■■□□□ 1.65
DCLRE1AQ6PJP8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
DCLRE1AQ6PJP8 AC097639.1-201ENST00000565519 1891 ntBASIC25.36■■□□□ 1.65
DCLRE1AQ6PJP8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
DCLRE1AQ6PJP8 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.36■■□□□ 1.65
DCLRE1AQ6PJP8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.36■■□□□ 1.65
DCLRE1AQ6PJP8 AC010501.1-201ENST00000606270 1962 ntBASIC25.36■■□□□ 1.65
DCLRE1AQ6PJP8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
DCLRE1AQ6PJP8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
DCLRE1AQ6PJP8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DCLRE1AQ6PJP8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.35■■□□□ 1.65
DCLRE1AQ6PJP8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.35■■□□□ 1.65
DCLRE1AQ6PJP8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
DCLRE1AQ6PJP8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
DCLRE1AQ6PJP8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.35■■□□□ 1.65
DCLRE1AQ6PJP8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
DCLRE1AQ6PJP8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DCLRE1AQ6PJP8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DCLRE1AQ6PJP8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
DCLRE1AQ6PJP8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DCLRE1AQ6PJP8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DCLRE1AQ6PJP8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.33■■□□□ 1.65
DCLRE1AQ6PJP8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.33■■□□□ 1.65
DCLRE1AQ6PJP8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.33■■□□□ 1.65
DCLRE1AQ6PJP8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.33■■□□□ 1.65
DCLRE1AQ6PJP8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
DCLRE1AQ6PJP8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
DCLRE1AQ6PJP8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DCLRE1AQ6PJP8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DCLRE1AQ6PJP8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.32■■□□□ 1.64
DCLRE1AQ6PJP8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.32■■□□□ 1.64
DCLRE1AQ6PJP8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DCLRE1AQ6PJP8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.32■■□□□ 1.64
DCLRE1AQ6PJP8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.32■■□□□ 1.64
DCLRE1AQ6PJP8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DCLRE1AQ6PJP8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.32■■□□□ 1.64
DCLRE1AQ6PJP8 AC092803.2-201ENST00000564287 1899 ntBASIC25.32■■□□□ 1.64
DCLRE1AQ6PJP8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DCLRE1AQ6PJP8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DCLRE1AQ6PJP8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
DCLRE1AQ6PJP8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DCLRE1AQ6PJP8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
DCLRE1AQ6PJP8 UNC93B8-201ENST00000511903 705 ntBASIC25.31■■□□□ 1.64
DCLRE1AQ6PJP8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
DCLRE1AQ6PJP8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DCLRE1AQ6PJP8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DCLRE1AQ6PJP8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DCLRE1AQ6PJP8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
DCLRE1AQ6PJP8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.3■■□□□ 1.64
DCLRE1AQ6PJP8 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.3■■□□□ 1.64
DCLRE1AQ6PJP8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.3■■□□□ 1.64
DCLRE1AQ6PJP8 AC092028.1-203ENST00000608262 953 ntBASIC25.3■■□□□ 1.64
DCLRE1AQ6PJP8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.3■■□□□ 1.64
DCLRE1AQ6PJP8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.29■■□□□ 1.64
DCLRE1AQ6PJP8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
DCLRE1AQ6PJP8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
DCLRE1AQ6PJP8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.29■■□□□ 1.64
DCLRE1AQ6PJP8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.29■■□□□ 1.64
DCLRE1AQ6PJP8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
DCLRE1AQ6PJP8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DCLRE1AQ6PJP8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DCLRE1AQ6PJP8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DCLRE1AQ6PJP8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DCLRE1AQ6PJP8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
DCLRE1AQ6PJP8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.28■■□□□ 1.64
DCLRE1AQ6PJP8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DCLRE1AQ6PJP8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DCLRE1AQ6PJP8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
DCLRE1AQ6PJP8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DCLRE1AQ6PJP8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DCLRE1AQ6PJP8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.27■■□□□ 1.64
DCLRE1AQ6PJP8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DCLRE1AQ6PJP8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.27■■□□□ 1.64
DCLRE1AQ6PJP8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DCLRE1AQ6PJP8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DCLRE1AQ6PJP8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
DCLRE1AQ6PJP8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.26■■□□□ 1.63
DCLRE1AQ6PJP8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms