Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
USH1GQ495M9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.27■■□□□ 1.96
USH1GQ495M9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USH1GQ495M9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.27■■□□□ 1.96
USH1GQ495M9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
USH1GQ495M9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USH1GQ495M9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.26■■□□□ 1.95
USH1GQ495M9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USH1GQ495M9 FOXO3B-201ENST00000395675 1928 ntBASIC27.26■■□□□ 1.95
USH1GQ495M9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USH1GQ495M9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USH1GQ495M9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USH1GQ495M9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
USH1GQ495M9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.25■■□□□ 1.95
USH1GQ495M9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USH1GQ495M9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
USH1GQ495M9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USH1GQ495M9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
USH1GQ495M9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.23■■□□□ 1.95
USH1GQ495M9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
USH1GQ495M9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
USH1GQ495M9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
USH1GQ495M9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.22■■□□□ 1.95
USH1GQ495M9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
USH1GQ495M9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
USH1GQ495M9 Z92544.1-202ENST00000571933 1220 ntBASIC27.22■■□□□ 1.95
USH1GQ495M9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
USH1GQ495M9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
USH1GQ495M9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
USH1GQ495M9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
USH1GQ495M9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
USH1GQ495M9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
USH1GQ495M9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
USH1GQ495M9 BX664725.1-201ENST00000438252 379 ntBASIC27.21■■□□□ 1.95
USH1GQ495M9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
USH1GQ495M9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.21■■□□□ 1.95
USH1GQ495M9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.21■■□□□ 1.95
USH1GQ495M9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
USH1GQ495M9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
USH1GQ495M9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
USH1GQ495M9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.2■■□□□ 1.94
USH1GQ495M9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
USH1GQ495M9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.19■■□□□ 1.94
USH1GQ495M9 MIR4281-201ENST00000580852 62 ntBASIC27.19■■□□□ 1.94
USH1GQ495M9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.19■■□□□ 1.94
USH1GQ495M9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
USH1GQ495M9 AC091060.1-201ENST00000623524 1766 ntBASIC27.19■■□□□ 1.94
USH1GQ495M9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.19■■□□□ 1.94
USH1GQ495M9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
USH1GQ495M9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.18■■□□□ 1.94
USH1GQ495M9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.18■■□□□ 1.94
USH1GQ495M9 KRT125P-201ENST00000546827 989 ntBASIC27.18■■□□□ 1.94
USH1GQ495M9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
USH1GQ495M9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
USH1GQ495M9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.17■■□□□ 1.94
USH1GQ495M9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
USH1GQ495M9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
USH1GQ495M9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
USH1GQ495M9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.17■■□□□ 1.94
USH1GQ495M9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
USH1GQ495M9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
USH1GQ495M9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
USH1GQ495M9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
USH1GQ495M9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.16■■□□□ 1.94
USH1GQ495M9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.16■■□□□ 1.94
USH1GQ495M9 MIR4787-201ENST00000607364 84 ntBASIC27.16■■□□□ 1.94
USH1GQ495M9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.16■■□□□ 1.94
USH1GQ495M9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
USH1GQ495M9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
USH1GQ495M9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.15■■□□□ 1.94
USH1GQ495M9 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.15■■□□□ 1.94
USH1GQ495M9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
USH1GQ495M9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.14■■□□□ 1.94
USH1GQ495M9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
USH1GQ495M9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.14■■□□□ 1.94
USH1GQ495M9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
USH1GQ495M9 AC137630.3-201ENST00000607245 391 ntBASIC27.14■■□□□ 1.94
USH1GQ495M9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.14■■□□□ 1.94
USH1GQ495M9 AC011551.1-201ENST00000614101 683 ntBASIC27.14■■□□□ 1.94
USH1GQ495M9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
USH1GQ495M9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
USH1GQ495M9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
USH1GQ495M9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
USH1GQ495M9 DUSP8P4-201ENST00000399538 1761 ntBASIC27.13■■□□□ 1.93
USH1GQ495M9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
USH1GQ495M9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
USH1GQ495M9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
USH1GQ495M9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
USH1GQ495M9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
USH1GQ495M9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
USH1GQ495M9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
USH1GQ495M9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
USH1GQ495M9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.11■■□□□ 1.93
USH1GQ495M9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
USH1GQ495M9 AL356441.2-201ENST00000443009 864 ntBASIC27.1■■□□□ 1.93
USH1GQ495M9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.1■■□□□ 1.93
USH1GQ495M9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
USH1GQ495M9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.09■■□□□ 1.93
USH1GQ495M9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.09■■□□□ 1.93
USH1GQ495M9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms