Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 RPS2YGL123W 765 nt5.78□□□□□ -1.48
RPN9Q04062 TKL1YPR074C 2043 nt5.78□□□□□ -1.48
RPN9Q04062 SEC18YBR080C 2277 nt5.78□□□□□ -1.48
RPN9Q04062 AIM17YHL021C 1398 nt5.78□□□□□ -1.48
RPN9Q04062 VPS5YOR069W 2028 nt5.77□□□□□ -1.49
RPN9Q04062 HSP78YDR258C 2436 nt5.77□□□□□ -1.49
RPN9Q04062 YER148W-AYER148W-A 579 nt5.77□□□□□ -1.49
RPN9Q04062 YJU2YKL095W 837 nt5.77□□□□□ -1.49
RPN9Q04062 RPL10YLR075W 666 nt5.77□□□□□ -1.49
RPN9Q04062 GPA2YER020W 1350 nt5.77□□□□□ -1.49
RPN9Q04062 HIR1YBL008W 2523 nt5.77□□□□□ -1.49
RPN9Q04062 ERC1YHR032W 1746 nt5.77□□□□□ -1.49
RPN9Q04062 YML082WYML082W 1950 nt5.76□□□□□ -1.49
RPN9Q04062 NOP7YGR103W 1818 nt5.76□□□□□ -1.49
RPN9Q04062 YER186CYER186C 921 nt5.76□□□□□ -1.49
RPN9Q04062 SHP1YBL058W 1272 nt5.76□□□□□ -1.49
RPN9Q04062 GLE1YDL207W 1617 nt5.76□□□□□ -1.49
RPN9Q04062 DPB2YPR175W 2070 nt5.76□□□□□ -1.49
RPN9Q04062 VPS70YJR126C 2436 nt5.76□□□□□ -1.49
RPN9Q04062 PUF3YLL013C 2640 nt5.76□□□□□ -1.49
RPN9Q04062 YMR155WYMR155W 1644 nt5.75□□□□□ -1.49
RPN9Q04062 KSS1YGR040W 1107 nt5.75□□□□□ -1.49
RPN9Q04062 NPA3YJR072C 1158 nt5.75□□□□□ -1.49
RPN9Q04062 SNO4YMR322C 714 nt5.75□□□□□ -1.49
RPN9Q04062 HSP33YOR391C 714 nt5.75□□□□□ -1.49
RPN9Q04062 HSP32YPL280W 714 nt5.75□□□□□ -1.49
RPN9Q04062 MLC2YPR188C 492 nt5.75□□□□□ -1.49
RPN9Q04062 AMA1YGR225W 1782 nt5.74□□□□□ -1.49
RPN9Q04062 YIR007WYIR007W 2295 nt5.74□□□□□ -1.49
RPN9Q04062 PTK2YJR059W 2457 nt5.74□□□□□ -1.49
RPN9Q04062 DUR1,2YBR208C 5508 nt5.74□□□□□ -1.49
RPN9Q04062 CNM67YNL225C 1746 nt5.74□□□□□ -1.49
RPN9Q04062 CST6YIL036W 1764 nt5.73□□□□□ -1.49
RPN9Q04062 ATO3YDR384C 828 nt5.73□□□□□ -1.49
RPN9Q04062 YEA6YEL006W 1008 nt5.73□□□□□ -1.49
RPN9Q04062 SNN1YNL086W 309 nt5.73□□□□□ -1.49
RPN9Q04062 BPL1YDL141W 2073 nt5.73□□□□□ -1.49
RPN9Q04062 UTP9YHR196W 1728 nt5.72□□□□□ -1.49
RPN9Q04062 AMD1YML035C 2433 nt5.72□□□□□ -1.49
RPN9Q04062 YCL065WYCL065W 369 nt5.72□□□□□ -1.49
RPN9Q04062 GPT2YKR067W 2232 nt5.72□□□□□ -1.49
RPN9Q04062 UBA1YKL210W 3075 nt5.72□□□□□ -1.49
RPN9Q04062 YDL057WYDL057W 987 nt5.71□□□□□ -1.5
RPN9Q04062 RRP4YHR069C 1080 nt5.71□□□□□ -1.5
RPN9Q04062 APS3YJL024C 585 nt5.71□□□□□ -1.5
RPN9Q04062 YPL102CYPL102C 303 nt5.71□□□□□ -1.5
RPN9Q04062 YDL114WYDL114W 927 nt5.7□□□□□ -1.5
RPN9Q04062 YRA1YDR381W 681 nt5.7□□□□□ -1.5
RPN9Q04062 SEC20YDR498C 1152 nt5.7□□□□□ -1.5
RPN9Q04062 DOM34YNL001W 1161 nt5.7□□□□□ -1.5
RPN9Q04062 MCM6YGL201C 3054 nt5.7□□□□□ -1.5
RPN9Q04062 APM4YOL062C 1476 nt5.7□□□□□ -1.5
RPN9Q04062 ATP1YBL099W 1638 nt5.7□□□□□ -1.5
RPN9Q04062 DBP9YLR276C 1785 nt5.7□□□□□ -1.5
RPN9Q04062 MRC1YCL061C 3291 nt5.7□□□□□ -1.5
RPN9Q04062 MKK2YPL140C 1521 nt5.69□□□□□ -1.5
RPN9Q04062 YEH1YLL012W 1722 nt5.69□□□□□ -1.5
RPN9Q04062 ROG3YFR022W 2202 nt5.69□□□□□ -1.5
RPN9Q04062 MDH3YDL078C 1032 nt5.69□□□□□ -1.5
RPN9Q04062 CBT1YKL208W 816 nt5.69□□□□□ -1.5
RPN9Q04062 YKR073CYKR073C 321 nt5.69□□□□□ -1.5
RPN9Q04062 CPA1YOR303W 1236 nt5.69□□□□□ -1.5
RPN9Q04062 CLB2YPR119W 1476 nt5.69□□□□□ -1.5
RPN9Q04062 ECM7YLR443W 1347 nt5.69□□□□□ -1.5
RPN9Q04062 VBA1YMR088C 1689 nt5.69□□□□□ -1.5
RPN9Q04062 YFL042CYFL042C 2025 nt5.69□□□□□ -1.5
RPN9Q04062 YER010CYER010C 705 nt5.68□□□□□ -1.5
RPN9Q04062 YML131WYML131W 1098 nt5.68□□□□□ -1.5
RPN9Q04062 YNL108CYNL108C 813 nt5.68□□□□□ -1.5
RPN9Q04062 VNX1YNL321W 2727 nt5.68□□□□□ -1.5
RPN9Q04062 SNZ3YFL059W 897 nt5.67□□□□□ -1.5
RPN9Q04062 PAN6YIL145C 930 nt5.67□□□□□ -1.5
RPN9Q04062 SNZ2YNL333W 897 nt5.67□□□□□ -1.5
RPN9Q04062 YME1YPR024W 2244 nt5.67□□□□□ -1.5
RPN9Q04062 PRP46YPL151C 1356 nt5.67□□□□□ -1.5
RPN9Q04062 QDR3YBR043C 2070 nt5.67□□□□□ -1.5
RPN9Q04062 CLB1YGR108W 1416 nt5.66□□□□□ -1.5
RPN9Q04062 SMF2YHR050W 1650 nt5.66□□□□□ -1.5
RPN9Q04062 EIS1YMR031C 2532 nt5.66□□□□□ -1.5
RPN9Q04062 ALD6YPL061W 1503 nt5.66□□□□□ -1.5
RPN9Q04062 YCR047W-AYCR047W-A 207 nt5.66□□□□□ -1.5
RPN9Q04062 EGD2YHR193C 525 nt5.66□□□□□ -1.5
RPN9Q04062 YNL067W-AYNL067W-A 147 nt5.66□□□□□ -1.5
RPN9Q04062 YOL131WYOL131W 327 nt5.66□□□□□ -1.5
RPN9Q04062 YBR056C-BYBR056C-B 159 nt5.66□□□□□ -1.5
RPN9Q04062 GUA1YMR217W 1578 nt5.66□□□□□ -1.5
RPN9Q04062 CBP4YGR174C 513 nt5.65□□□□□ -1.5
RPN9Q04062 CSG2YBR036C 1233 nt5.65□□□□□ -1.5
RPN9Q04062 MID1YNL291C 1647 nt5.65□□□□□ -1.51
RPN9Q04062 SFB3YHR098C 2790 nt5.65□□□□□ -1.51
RPN9Q04062 ORC5YNL261W 1440 nt5.65□□□□□ -1.51
RPN9Q04062 SNF11YDR073W 510 nt5.64□□□□□ -1.51
RPN9Q04062 YDR154CYDR154C 351 nt5.64□□□□□ -1.51
RPN9Q04062 NHP6BYBR089C-A 300 nt5.64□□□□□ -1.51
RPN9Q04062 PDB1YBR221C 1101 nt5.64□□□□□ -1.51
RPN9Q04062 AVO1YOL078W 3531 nt5.64□□□□□ -1.51
RPN9Q04062 MAL11YGR289C 1851 nt5.64□□□□□ -1.51
RPN9Q04062 BUL1YMR275C 2931 nt5.64□□□□□ -1.51
RPN9Q04062 ATG18YFR021W 1503 nt5.64□□□□□ -1.51
RPN9Q04062 ERG7YHR072W 2196 nt5.63□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 32.5 ms