Protein–RNA interactions for Protein: P62736

ACTA2, Actin, aortic smooth muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA2P62736 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
ACTA2P62736 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ACTA2P62736 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACTA2P62736 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.89■□□□□ 0.93
ACTA2P62736 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ACTA2P62736 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ACTA2P62736 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.89■□□□□ 0.93
ACTA2P62736 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.89■□□□□ 0.93
ACTA2P62736 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACTA2P62736 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACTA2P62736 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.88■□□□□ 0.93
ACTA2P62736 MIR7108-201ENST00000614319 87 ntBASIC20.88■□□□□ 0.93
ACTA2P62736 MIR6089-201ENST00000616698 64 ntBASIC20.88■□□□□ 0.93
ACTA2P62736 CR559946.2-201ENST00000623684 991 ntBASIC20.88■□□□□ 0.93
ACTA2P62736 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACTA2P62736 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACTA2P62736 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACTA2P62736 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACTA2P62736 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACTA2P62736 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTA2P62736 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
ACTA2P62736 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTA2P62736 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTA2P62736 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTA2P62736 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTA2P62736 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.87■□□□□ 0.93
ACTA2P62736 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.87■□□□□ 0.93
ACTA2P62736 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ACTA2P62736 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTA2P62736 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACTA2P62736 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACTA2P62736 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACTA2P62736 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACTA2P62736 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.86■□□□□ 0.93
ACTA2P62736 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACTA2P62736 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACTA2P62736 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.85■□□□□ 0.93
ACTA2P62736 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACTA2P62736 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACTA2P62736 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.85■□□□□ 0.93
ACTA2P62736 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACTA2P62736 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ACTA2P62736 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ACTA2P62736 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACTA2P62736 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACTA2P62736 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.84■□□□□ 0.93
ACTA2P62736 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.84■□□□□ 0.93
ACTA2P62736 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTA2P62736 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACTA2P62736 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTA2P62736 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTA2P62736 MIR3960-201ENST00000583311 91 ntBASIC20.84■□□□□ 0.93
ACTA2P62736 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.84■□□□□ 0.93
ACTA2P62736 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTA2P62736 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACTA2P62736 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTA2P62736 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
ACTA2P62736 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ACTA2P62736 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACTA2P62736 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ACTA2P62736 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.83■□□□□ 0.93
ACTA2P62736 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
ACTA2P62736 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ACTA2P62736 AC133561.1-201ENST00000568600 2415 ntBASIC20.83■□□□□ 0.92
ACTA2P62736 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.82■□□□□ 0.92
ACTA2P62736 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ACTA2P62736 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACTA2P62736 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACTA2P62736 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACTA2P62736 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACTA2P62736 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACTA2P62736 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.82■□□□□ 0.92
ACTA2P62736 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACTA2P62736 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.81■□□□□ 0.92
ACTA2P62736 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ACTA2P62736 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACTA2P62736 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.81■□□□□ 0.92
ACTA2P62736 AC025884.2-201ENST00000553429 711 ntBASIC20.81■□□□□ 0.92
ACTA2P62736 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.81■□□□□ 0.92
ACTA2P62736 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ACTA2P62736 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.81■□□□□ 0.92
ACTA2P62736 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACTA2P62736 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ACTA2P62736 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.8■□□□□ 0.92
ACTA2P62736 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ACTA2P62736 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.8■□□□□ 0.92
ACTA2P62736 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ACTA2P62736 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.8■□□□□ 0.92
ACTA2P62736 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACTA2P62736 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ACTA2P62736 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.8■□□□□ 0.92
ACTA2P62736 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.8■□□□□ 0.92
ACTA2P62736 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.8■□□□□ 0.92
ACTA2P62736 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACTA2P62736 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACTA2P62736 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ACTA2P62736 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.79■□□□□ 0.92
ACTA2P62736 AL157400.5-201ENST00000507624 621 ntBASIC20.79■□□□□ 0.92
ACTA2P62736 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ACTA2P62736 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms