Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.18□□□□□ -1.748e-7■■■■□ 26.3
NCBP2P52298 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.16□□□□□ -1.748e-7■■■■□ 26.3
NCBP2P52298 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.14□□□□□ -1.758e-7■■■■□ 26.3
NCBP2P52298 CACNB4-218ENST00000635930 4484 ntTSL 54.1□□□□□ -1.758e-7■■■■□ 26.3
NCBP2P52298 CACNB4-212ENST00000635738 7854 ntTSL 53.93□□□□□ -1.788e-7■■■■□ 26.3
NCBP2P52298 CACNB4-244ENST00000637232 4024 ntTSL 53.74□□□□□ -1.818e-7■■■■□ 26.3
NCBP2P52298 CACNB4-235ENST00000636810 3754 ntTSL 53.43□□□□□ -1.868e-7■■■■□ 26.3
NCBP2P52298 CACNB4-241ENST00000637132 3877 ntTSL 53.37□□□□□ -1.878e-7■■■■□ 26.3
NCBP2P52298 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.14□□□□□ -1.918e-7■■■■□ 26.3
NCBP2P52298 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.55□□□□□ -28e-7■■■■□ 26.3
NCBP2P52298 CDK19-208ENST00000497709 1117 ntTSL 314.17□□□□□ -0.149e-7■■■■□ 26.2
NCBP2P52298 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.2□□□□□ -1.19e-7■■■■□ 26.2
NCBP2P52298 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.05■□□□□ 0.643e-7■■■■□ 26.2
NCBP2P52298 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.083e-7■■■■□ 26.2
NCBP2P52298 TBC1D17-207ENST00000599049 1742 ntTSL 515.13■□□□□ 0.013e-7■■■■□ 26.2
NCBP2P52298 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15□□□□□ -0.013e-7■■■■□ 26.2
NCBP2P52298 TBC1D17-204ENST00000594996 1161 ntTSL 1 (best)13.89□□□□□ -0.193e-7■■■■□ 26.2
NCBP2P52298 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.213e-7■■■■□ 26.2
NCBP2P52298 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.73□□□□□ -0.213e-7■■■■□ 26.2
NCBP2P52298 ZNF644-211ENST00000498303 514 ntTSL 1 (best)13.07□□□□□ -0.323e-7■■■■□ 26.2
NCBP2P52298 TBC1D17-206ENST00000598789 556 ntTSL 412.65□□□□□ -0.383e-7■■■■□ 26.2
NCBP2P52298 ZNF644-210ENST00000495966 820 ntTSL 36.85□□□□□ -1.313e-7■■■■□ 26.2
NCBP2P52298 KLHDC10-202ENST00000463413 503 ntTSL 223.54■■□□□ 1.362e-7■■■■□ 26.1
NCBP2P52298 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.472e-7■■■■□ 26.1
NCBP2P52298 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.332e-7■■■■□ 26.1
NCBP2P52298 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.55■□□□□ 0.242e-7■■■■□ 26.1
NCBP2P52298 DRG2-219ENST00000583162 1066 ntTSL 216.25■□□□□ 0.192e-7■■■■□ 26.1
NCBP2P52298 DRG2-216ENST00000582314 1530 ntTSL 515.82■□□□□ 0.122e-7■■■■□ 26.1
NCBP2P52298 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.042e-7■■■■□ 26.1
NCBP2P52298 DRG2-206ENST00000496428 795 ntTSL 315.09■□□□□ 0.012e-7■■■■□ 26.1
NCBP2P52298 DRG2-209ENST00000577771 641 ntTSL 214.67□□□□□ -0.062e-7■■■■□ 26.1
NCBP2P52298 DRG2-203ENST00000467099 2531 ntTSL 214.39□□□□□ -0.112e-7■■■■□ 26.1
NCBP2P52298 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.122e-7■■■■□ 26.1
NCBP2P52298 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.03□□□□□ -0.162e-7■■■■□ 26.1
NCBP2P52298 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.65□□□□□ -0.222e-7■■■■□ 26.1
NCBP2P52298 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.63□□□□□ -0.232e-7■■■■□ 26.1
NCBP2P52298 AC004076.1-203ENST00000415705 652 ntTSL 213.5□□□□□ -0.252e-7■■■■□ 26.1
NCBP2P52298 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.47□□□□□ -0.252e-7■■■■□ 26.1
NCBP2P52298 DRG2-214ENST00000580055 1838 ntTSL 513.45□□□□□ -0.262e-7■■■■□ 26.1
NCBP2P52298 ZNF772-205ENST00000450712 587 ntTSL 213.24□□□□□ -0.292e-7■■■■□ 26.1
NCBP2P52298 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.91□□□□□ -0.342e-7■■■■□ 26.1
NCBP2P52298 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.86□□□□□ -0.352e-7■■■■□ 26.1
NCBP2P52298 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC12.59□□□□□ -0.392e-7■■■■□ 26.1
NCBP2P52298 ZNF24-205ENST00000590140 756 ntTSL 311.97□□□□□ -0.492e-7■■■■□ 26.1
NCBP2P52298 ZNF772-209ENST00000615214 1506 ntTSL 5 BASIC11.38□□□□□ -0.592e-7■■■■□ 26.1
NCBP2P52298 DRG2-221ENST00000584212 465 ntTSL 411.34□□□□□ -0.592e-7■■■■□ 26.1
NCBP2P52298 DRG2-213ENST00000579601 550 ntTSL 411.34□□□□□ -0.592e-7■■■■□ 26.1
NCBP2P52298 DRG2-208ENST00000577450 566 ntTSL 411.34□□□□□ -0.592e-7■■■■□ 26.1
NCBP2P52298 DRG2-217ENST00000582419 565 ntTSL 410.66□□□□□ -0.72e-7■■■■□ 26.1
NCBP2P52298 DRG2-212ENST00000579224 683 ntTSL 510.66□□□□□ -0.72e-7■■■■□ 26.1
NCBP2P52298 DRG2-215ENST00000580929 389 ntTSL 510.64□□□□□ -0.712e-7■■■■□ 26.1
NCBP2P52298 ZNF772-201ENST00000343280 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.782e-7■■■■□ 26.1
NCBP2P52298 ZNF772-208ENST00000610548 1554 ntTSL 5 BASIC10.01□□□□□ -0.812e-7■■■■□ 26.1
NCBP2P52298 SNHG20-201ENST00000366365 1028 ntTSL 29.48□□□□□ -0.892e-20■■■■□ 26.1
NCBP2P52298 VPS50-201ENST00000251739 1193 ntTSL 1 (best) BASIC9.26□□□□□ -0.932e-7■■■■□ 26.1
NCBP2P52298 DRG2-210ENST00000578173 535 ntTSL 29.25□□□□□ -0.932e-7■■■■□ 26.1
NCBP2P52298 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC9.2□□□□□ -0.942e-7■■■■□ 26.1
NCBP2P52298 NUDT13-204ENST00000469925 365 ntTSL 38.81□□□□□ -12e-7■■■■□ 26.1
NCBP2P52298 RPARP-AS1-203ENST00000494270 711 ntTSL 2 BASIC8.55□□□□□ -1.042e-7■■■■□ 26.1
NCBP2P52298 VPS50-207ENST00000458530 667 ntTSL 48.43□□□□□ -1.062e-7■■■■□ 26.1
NCBP2P52298 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.17□□□□□ -1.12e-7■■■■□ 26.1
NCBP2P52298 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.222e-7■■■■□ 26.1
NCBP2P52298 NUDT13-205ENST00000488223 2140 ntTSL 1 (best)7.42□□□□□ -1.222e-7■■■■□ 26.1
NCBP2P52298 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.38□□□□□ -1.232e-7■■■■□ 26.1
NCBP2P52298 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC7.36□□□□□ -1.232e-7■■■■□ 26.1
NCBP2P52298 VPS50-203ENST00000436177 603 ntTSL 47.02□□□□□ -1.292e-7■■■■□ 26.1
NCBP2P52298 VPS50-204ENST00000438395 538 ntTSL 37.02□□□□□ -1.292e-7■■■■□ 26.1
NCBP2P52298 DRG2-204ENST00000473213 595 ntTSL 26.85□□□□□ -1.312e-7■■■■□ 26.1
NCBP2P52298 VPS50-218ENST00000485994 573 ntTSL 26.39□□□□□ -1.392e-7■■■■□ 26.1
NCBP2P52298 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.412e-7■■■■□ 26.1
NCBP2P52298 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.14□□□□□ -1.432e-7■■■■□ 26.1
NCBP2P52298 DRG2-211ENST00000578767 577 ntTSL 46.02□□□□□ -1.452e-7■■■■□ 26.1
NCBP2P52298 VPS50-205ENST00000441602 3474 ntTSL 1 (best)5.72□□□□□ -1.492e-7■■■■□ 26.1
NCBP2P52298 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.58□□□□□ -1.522e-7■■■■□ 26.1
NCBP2P52298 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.532e-7■■■■□ 26.1
NCBP2P52298 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.612e-7■■■■□ 26.1
NCBP2P52298 VPS50-214ENST00000477935 760 ntTSL 23.38□□□□□ -1.872e-7■■■■□ 26.1
NCBP2P52298 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.59■■□□□ 1.379e-7■■■■□ 26.1
NCBP2P52298 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.139e-7■■■■□ 26.1
NCBP2P52298 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.829e-7■■■■□ 26.1
NCBP2P52298 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.71■□□□□ 0.437e-7■■■■□ 26.1
NCBP2P52298 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.15■□□□□ 0.347e-7■■■■□ 26.1
NCBP2P52298 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.54■□□□□ 0.249e-7■■■■□ 26.1
NCBP2P52298 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.117e-7■■■■□ 26.1
NCBP2P52298 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.287e-7■■■■□ 26.1
NCBP2P52298 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.477e-7■■■■□ 26.1
NCBP2P52298 LDB1-204ENST00000490751 762 ntTSL 228.66■■■□□ 2.181e-7■■■■□ 26
NCBP2P52298 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.891e-7■■■■□ 26
NCBP2P52298 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.07■■□□□ 1.61e-7■■■■□ 26
NCBP2P52298 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.18■■□□□ 1.461e-7■■■■□ 26
NCBP2P52298 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.04■■□□□ 1.441e-7■■■■□ 26
NCBP2P52298 SFXN5-213ENST00000479293 1808 ntTSL 223.49■■□□□ 1.351e-7■■■■□ 26
NCBP2P52298 SFXN5-210ENST00000472259 1690 ntTSL 322.71■■□□□ 1.231e-7■■■■□ 26
NCBP2P52298 RP9P-202ENST00000450133 1212 ntBASIC22.64■■□□□ 1.211e-7■■■■□ 26
NCBP2P52298 TDP1-205ENST00000553527 910 ntTSL 321.69■■□□□ 1.061e-7■■■■□ 26
NCBP2P52298 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.041e-7■■■■□ 26
NCBP2P52298 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.011e-7■■■■□ 26
NCBP2P52298 TDP1-206ENST00000553569 879 ntTSL 321.13■□□□□ 0.971e-7■■■■□ 26
NCBP2P52298 TDP1-216ENST00000556867 748 ntTSL 221.07■□□□□ 0.961e-7■■■■□ 26
NCBP2P52298 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.49■□□□□ 0.711e-7■■■■□ 26
Retrieved 100 of 18,329 protein–RNA pairs in 774 ms