Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.34■■□□□ 1.81
CDK7P50613 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
CDK7P50613 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDK7P50613 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CDK7P50613 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDK7P50613 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.33■■□□□ 1.81
CDK7P50613 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDK7P50613 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
CDK7P50613 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDK7P50613 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDK7P50613 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDK7P50613 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.32■■□□□ 1.8
CDK7P50613 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDK7P50613 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.31■■□□□ 1.8
CDK7P50613 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.31■■□□□ 1.8
CDK7P50613 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CDK7P50613 AF131216.4-201ENST00000638924 1588 ntBASIC26.31■■□□□ 1.8
CDK7P50613 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDK7P50613 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.3■■□□□ 1.8
CDK7P50613 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDK7P50613 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDK7P50613 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.3■■□□□ 1.8
CDK7P50613 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDK7P50613 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDK7P50613 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.29■■□□□ 1.8
CDK7P50613 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.29■■□□□ 1.8
CDK7P50613 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.29■■□□□ 1.8
CDK7P50613 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.29■■□□□ 1.8
CDK7P50613 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.29■■□□□ 1.8
CDK7P50613 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CDK7P50613 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CDK7P50613 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDK7P50613 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDK7P50613 AP004609.3-201ENST00000610705 1884 ntBASIC26.28■■□□□ 1.8
CDK7P50613 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.27■■□□□ 1.8
CDK7P50613 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.27■■□□□ 1.8
CDK7P50613 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDK7P50613 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CDK7P50613 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.27■■□□□ 1.8
CDK7P50613 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CDK7P50613 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDK7P50613 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDK7P50613 AC106739.1-201ENST00000617035 715 ntBASIC26.26■■□□□ 1.79
CDK7P50613 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CDK7P50613 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDK7P50613 ZNRF2P3-201ENST00000424200 374 ntBASIC26.25■■□□□ 1.79
CDK7P50613 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDK7P50613 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDK7P50613 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CDK7P50613 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDK7P50613 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CDK7P50613 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.23■■□□□ 1.79
CDK7P50613 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
CDK7P50613 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.23■■□□□ 1.79
CDK7P50613 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.23■■□□□ 1.79
CDK7P50613 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.23■■□□□ 1.79
CDK7P50613 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CDK7P50613 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDK7P50613 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDK7P50613 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK7P50613 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.22■■□□□ 1.79
CDK7P50613 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK7P50613 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.22■■□□□ 1.79
CDK7P50613 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.22■■□□□ 1.79
CDK7P50613 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.22■■□□□ 1.79
CDK7P50613 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK7P50613 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDK7P50613 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDK7P50613 PBX2P1-201ENST00000493219 1291 ntBASIC26.21■■□□□ 1.79
CDK7P50613 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDK7P50613 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CDK7P50613 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDK7P50613 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.2■■□□□ 1.78
CDK7P50613 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDK7P50613 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDK7P50613 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
CDK7P50613 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.2■■□□□ 1.78
CDK7P50613 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDK7P50613 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
CDK7P50613 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDK7P50613 RARRES2P6-201ENST00000567333 442 ntBASIC26.19■■□□□ 1.78
CDK7P50613 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.19■■□□□ 1.78
CDK7P50613 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.19■■□□□ 1.78
CDK7P50613 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDK7P50613 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.18■■□□□ 1.78
CDK7P50613 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.18■■□□□ 1.78
CDK7P50613 AL031432.3-201ENST00000607698 485 ntBASIC26.18■■□□□ 1.78
CDK7P50613 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.18■■□□□ 1.78
CDK7P50613 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDK7P50613 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.17■■□□□ 1.78
CDK7P50613 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDK7P50613 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDK7P50613 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
CDK7P50613 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDK7P50613 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDK7P50613 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.16■■□□□ 1.78
CDK7P50613 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDK7P50613 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.16■■□□□ 1.78
CDK7P50613 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
CDK7P50613 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms