Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CPT1AP50416 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CPT1AP50416 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CPT1AP50416 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.48■■□□□ 1.83
CPT1AP50416 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CPT1AP50416 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.48■■□□□ 1.83
CPT1AP50416 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CPT1AP50416 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CPT1AP50416 MIR638-201ENST00000385237 100 ntBASIC26.47■■□□□ 1.83
CPT1AP50416 AL136116.3-201ENST00000402907 1138 ntBASIC26.47■■□□□ 1.83
CPT1AP50416 AL356740.2-201ENST00000601559 647 ntBASIC26.47■■□□□ 1.83
CPT1AP50416 AL139246.5-201ENST00000606645 996 ntBASIC26.47■■□□□ 1.83
CPT1AP50416 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CPT1AP50416 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CPT1AP50416 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.46■■□□□ 1.83
CPT1AP50416 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
CPT1AP50416 FOXO3B-201ENST00000395675 1928 ntBASIC26.46■■□□□ 1.83
CPT1AP50416 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CPT1AP50416 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.46■■□□□ 1.83
CPT1AP50416 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CPT1AP50416 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.46■■□□□ 1.83
CPT1AP50416 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CPT1AP50416 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CPT1AP50416 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.45■■□□□ 1.82
CPT1AP50416 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.45■■□□□ 1.82
CPT1AP50416 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.45■■□□□ 1.82
CPT1AP50416 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CPT1AP50416 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.44■■□□□ 1.82
CPT1AP50416 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CPT1AP50416 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CPT1AP50416 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CPT1AP50416 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.43■■□□□ 1.82
CPT1AP50416 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CPT1AP50416 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
CPT1AP50416 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CPT1AP50416 MIR935-201ENST00000401179 91 ntBASIC26.43■■□□□ 1.82
CPT1AP50416 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.43■■□□□ 1.82
CPT1AP50416 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.43■■□□□ 1.82
CPT1AP50416 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.43■■□□□ 1.82
CPT1AP50416 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CPT1AP50416 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CPT1AP50416 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CPT1AP50416 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CPT1AP50416 AF131216.4-201ENST00000638924 1588 ntBASIC26.42■■□□□ 1.82
CPT1AP50416 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.42■■□□□ 1.82
CPT1AP50416 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CPT1AP50416 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.42■■□□□ 1.82
CPT1AP50416 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.42■■□□□ 1.82
CPT1AP50416 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CPT1AP50416 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CPT1AP50416 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
CPT1AP50416 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPT1AP50416 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPT1AP50416 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPT1AP50416 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CPT1AP50416 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
CPT1AP50416 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.41■■□□□ 1.82
CPT1AP50416 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPT1AP50416 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPT1AP50416 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPT1AP50416 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
CPT1AP50416 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CPT1AP50416 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CPT1AP50416 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.4■■□□□ 1.82
CPT1AP50416 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
CPT1AP50416 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.4■■□□□ 1.82
CPT1AP50416 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.4■■□□□ 1.82
CPT1AP50416 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.4■■□□□ 1.82
CPT1AP50416 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
CPT1AP50416 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CPT1AP50416 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CPT1AP50416 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.38■■□□□ 1.81
CPT1AP50416 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.38■■□□□ 1.81
CPT1AP50416 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CPT1AP50416 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CPT1AP50416 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CPT1AP50416 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.38■■□□□ 1.81
CPT1AP50416 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CPT1AP50416 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CPT1AP50416 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CPT1AP50416 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CPT1AP50416 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CPT1AP50416 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CPT1AP50416 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.36■■□□□ 1.81
CPT1AP50416 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.36■■□□□ 1.81
CPT1AP50416 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.36■■□□□ 1.81
CPT1AP50416 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CPT1AP50416 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.36■■□□□ 1.81
CPT1AP50416 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CPT1AP50416 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.35■■□□□ 1.81
CPT1AP50416 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.35■■□□□ 1.81
CPT1AP50416 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CPT1AP50416 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.34■■□□□ 1.81
CPT1AP50416 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CPT1AP50416 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.34■■□□□ 1.81
CPT1AP50416 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CPT1AP50416 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.34■■□□□ 1.81
CPT1AP50416 MIR4466-201ENST00000606121 54 ntBASIC26.34■■□□□ 1.81
CPT1AP50416 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CPT1AP50416 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms