Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCK1P35558 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCK1P35558 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCK1P35558 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.73■■□□□ 1.55
PCK1P35558 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCK1P35558 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCK1P35558 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
PCK1P35558 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.72■■□□□ 1.55
PCK1P35558 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCK1P35558 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
PCK1P35558 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCK1P35558 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
PCK1P35558 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCK1P35558 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.71■■□□□ 1.55
PCK1P35558 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCK1P35558 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
PCK1P35558 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCK1P35558 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCK1P35558 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCK1P35558 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCK1P35558 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCK1P35558 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.7■■□□□ 1.54
PCK1P35558 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCK1P35558 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCK1P35558 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCK1P35558 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.69■■□□□ 1.54
PCK1P35558 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.69■■□□□ 1.54
PCK1P35558 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCK1P35558 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.69■■□□□ 1.54
PCK1P35558 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCK1P35558 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
PCK1P35558 U85056.1-201ENST00000616429 682 ntBASIC24.69■■□□□ 1.54
PCK1P35558 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCK1P35558 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCK1P35558 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
PCK1P35558 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCK1P35558 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCK1P35558 SPCS2P3-201ENST00000500401 656 ntBASIC24.68■■□□□ 1.54
PCK1P35558 AC018755.3-202ENST00000596210 929 ntBASIC24.68■■□□□ 1.54
PCK1P35558 AP003733.4-201ENST00000623785 1697 ntBASIC24.68■■□□□ 1.54
PCK1P35558 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCK1P35558 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCK1P35558 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCK1P35558 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCK1P35558 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCK1P35558 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.66■■□□□ 1.54
PCK1P35558 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
PCK1P35558 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.66■■□□□ 1.54
PCK1P35558 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCK1P35558 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCK1P35558 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCK1P35558 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCK1P35558 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.65■■□□□ 1.54
PCK1P35558 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCK1P35558 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PCK1P35558 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCK1P35558 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.64■■□□□ 1.54
PCK1P35558 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.64■■□□□ 1.54
PCK1P35558 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.64■■□□□ 1.54
PCK1P35558 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCK1P35558 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCK1P35558 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
PCK1P35558 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
PCK1P35558 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCK1P35558 RPS2P7-201ENST00000447334 885 ntBASIC24.63■■□□□ 1.53
PCK1P35558 ABHD17AP5-201ENST00000580133 923 ntBASIC24.63■■□□□ 1.53
PCK1P35558 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCK1P35558 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.62■■□□□ 1.53
PCK1P35558 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.62■■□□□ 1.53
PCK1P35558 DUX4L9-201ENST00000449051 1259 ntBASIC24.62■■□□□ 1.53
PCK1P35558 MIR6765-201ENST00000614092 87 ntBASIC24.62■■□□□ 1.53
PCK1P35558 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCK1P35558 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCK1P35558 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.62■■□□□ 1.53
PCK1P35558 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCK1P35558 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCK1P35558 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
PCK1P35558 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.61■■□□□ 1.53
PCK1P35558 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCK1P35558 MIR6089-201ENST00000616698 64 ntBASIC24.61■■□□□ 1.53
PCK1P35558 AL139125.2-201ENST00000623134 1869 ntBASIC24.61■■□□□ 1.53
PCK1P35558 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCK1P35558 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCK1P35558 FOXO3B-201ENST00000395675 1928 ntBASIC24.61■■□□□ 1.53
PCK1P35558 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.61■■□□□ 1.53
PCK1P35558 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCK1P35558 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
PCK1P35558 KRT18P60-201ENST00000312876 1297 ntBASIC24.6■■□□□ 1.53
PCK1P35558 AC129492.7-201ENST00000622992 756 ntBASIC24.6■■□□□ 1.53
PCK1P35558 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.6■■□□□ 1.53
PCK1P35558 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.6■■□□□ 1.53
PCK1P35558 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.6■■□□□ 1.53
PCK1P35558 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
PCK1P35558 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PCK1P35558 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.59■■□□□ 1.53
PCK1P35558 AC087393.1-201ENST00000582896 145 ntBASIC24.59■■□□□ 1.53
PCK1P35558 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCK1P35558 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
PCK1P35558 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.59■■□□□ 1.53
PCK1P35558 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms