Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CKS2P33552 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKS2P33552 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CKS2P33552 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKS2P33552 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKS2P33552 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.28■□□□□ 0.36
CKS2P33552 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKS2P33552 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CKS2P33552 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.28■□□□□ 0.36
CKS2P33552 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CKS2P33552 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKS2P33552 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKS2P33552 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CKS2P33552 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CKS2P33552 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CKS2P33552 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CKS2P33552 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.27■□□□□ 0.36
CKS2P33552 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CKS2P33552 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CKS2P33552 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CKS2P33552 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CKS2P33552 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKS2P33552 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKS2P33552 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.26■□□□□ 0.35
CKS2P33552 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKS2P33552 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKS2P33552 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.26■□□□□ 0.35
CKS2P33552 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CKS2P33552 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKS2P33552 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CKS2P33552 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CKS2P33552 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CKS2P33552 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CKS2P33552 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CKS2P33552 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CKS2P33552 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CKS2P33552 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CKS2P33552 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CKS2P33552 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CKS2P33552 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CKS2P33552 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
CKS2P33552 CLDN5-201ENST00000403084 2357 ntBASIC17.24■□□□□ 0.35
CKS2P33552 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CKS2P33552 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKS2P33552 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKS2P33552 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKS2P33552 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.24■□□□□ 0.35
CKS2P33552 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CKS2P33552 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.24■□□□□ 0.35
CKS2P33552 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CKS2P33552 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKS2P33552 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CKS2P33552 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKS2P33552 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CKS2P33552 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKS2P33552 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CKS2P33552 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CKS2P33552 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKS2P33552 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CKS2P33552 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CKS2P33552 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CKS2P33552 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKS2P33552 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.23■□□□□ 0.35
CKS2P33552 SLC6A10P-202ENST00000431994 2058 ntBASIC17.23■□□□□ 0.35
CKS2P33552 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CKS2P33552 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKS2P33552 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.23■□□□□ 0.35
CKS2P33552 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKS2P33552 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CKS2P33552 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.22■□□□□ 0.35
CKS2P33552 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CKS2P33552 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKS2P33552 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKS2P33552 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKS2P33552 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKS2P33552 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKS2P33552 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKS2P33552 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKS2P33552 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.21■□□□□ 0.35
CKS2P33552 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKS2P33552 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKS2P33552 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CKS2P33552 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CKS2P33552 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.21■□□□□ 0.35
CKS2P33552 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.21■□□□□ 0.35
CKS2P33552 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.21■□□□□ 0.35
CKS2P33552 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.21■□□□□ 0.35
CKS2P33552 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKS2P33552 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKS2P33552 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CKS2P33552 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CKS2P33552 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKS2P33552 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKS2P33552 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.2■□□□□ 0.34
CKS2P33552 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.2■□□□□ 0.34
CKS2P33552 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKS2P33552 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.2■□□□□ 0.34
CKS2P33552 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CKS2P33552 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.2■□□□□ 0.34
CKS2P33552 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms