Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.85■□□□□ 0.77
LMO1P25800 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO1P25800 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LMO1P25800 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.85■□□□□ 0.77
LMO1P25800 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LMO1P25800 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LMO1P25800 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LMO1P25800 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO1P25800 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMO1P25800 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO1P25800 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMO1P25800 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMO1P25800 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO1P25800 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO1P25800 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO1P25800 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMO1P25800 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LMO1P25800 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMO1P25800 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LMO1P25800 RARRES2P2-201ENST00000394842 485 ntBASIC19.83■□□□□ 0.77
LMO1P25800 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LMO1P25800 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.83■□□□□ 0.76
LMO1P25800 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMO1P25800 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.83■□□□□ 0.76
LMO1P25800 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO1P25800 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.82■□□□□ 0.76
LMO1P25800 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO1P25800 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
LMO1P25800 HSD17B1P1-201ENST00000590052 955 ntBASIC19.82■□□□□ 0.76
LMO1P25800 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LMO1P25800 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMO1P25800 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
LMO1P25800 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMO1P25800 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMO1P25800 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMO1P25800 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.8■□□□□ 0.76
LMO1P25800 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.8■□□□□ 0.76
LMO1P25800 AC133561.1-201ENST00000568600 2415 ntBASIC19.8■□□□□ 0.76
LMO1P25800 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMO1P25800 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMO1P25800 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LMO1P25800 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMO1P25800 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.8■□□□□ 0.76
LMO1P25800 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LMO1P25800 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMO1P25800 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.79■□□□□ 0.76
LMO1P25800 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMO1P25800 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMO1P25800 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LMO1P25800 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LMO1P25800 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMO1P25800 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMO1P25800 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMO1P25800 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMO1P25800 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMO1P25800 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMO1P25800 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMO1P25800 AL592293.1-201ENST00000502889 1188 ntBASIC19.78■□□□□ 0.76
LMO1P25800 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.78■□□□□ 0.76
LMO1P25800 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LMO1P25800 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.78■□□□□ 0.76
LMO1P25800 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.78■□□□□ 0.76
LMO1P25800 AC012676.1-201ENST00000574705 1949 ntBASIC19.78■□□□□ 0.76
LMO1P25800 AL139125.2-201ENST00000623134 1869 ntBASIC19.77■□□□□ 0.76
LMO1P25800 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMO1P25800 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.77■□□□□ 0.76
LMO1P25800 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMO1P25800 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMO1P25800 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMO1P25800 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
LMO1P25800 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.77■□□□□ 0.76
LMO1P25800 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.77■□□□□ 0.76
LMO1P25800 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMO1P25800 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.77■□□□□ 0.76
LMO1P25800 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.76■□□□□ 0.75
LMO1P25800 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
LMO1P25800 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.76■□□□□ 0.75
LMO1P25800 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO1P25800 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.76■□□□□ 0.75
LMO1P25800 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO1P25800 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO1P25800 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO1P25800 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.76■□□□□ 0.75
LMO1P25800 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO1P25800 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.75■□□□□ 0.75
LMO1P25800 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMO1P25800 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.75■□□□□ 0.75
LMO1P25800 MIR6089-201ENST00000616698 64 ntBASIC19.75■□□□□ 0.75
LMO1P25800 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.75■□□□□ 0.75
LMO1P25800 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.75■□□□□ 0.75
LMO1P25800 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.75■□□□□ 0.75
LMO1P25800 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.75■□□□□ 0.75
LMO1P25800 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO1P25800 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LMO1P25800 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO1P25800 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.74■□□□□ 0.75
LMO1P25800 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO1P25800 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMO1P25800 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO1P25800 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms