Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.73■■□□□ 1.07
UBL4AP11441 AC129492.7-201ENST00000622992 756 ntBASIC21.73■■□□□ 1.07
UBL4AP11441 AC022211.4-201ENST00000625094 2161 ntBASIC21.72■■□□□ 1.07
UBL4AP11441 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.72■■□□□ 1.07
UBL4AP11441 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBL4AP11441 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBL4AP11441 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBL4AP11441 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBL4AP11441 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
UBL4AP11441 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBL4AP11441 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
UBL4AP11441 AC142381.3-201ENST00000568208 1670 ntBASIC21.72■■□□□ 1.07
UBL4AP11441 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBL4AP11441 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
UBL4AP11441 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBL4AP11441 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBL4AP11441 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBL4AP11441 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.71■■□□□ 1.07
UBL4AP11441 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBL4AP11441 SLC6A10P-202ENST00000431994 2058 ntBASIC21.71■■□□□ 1.07
UBL4AP11441 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBL4AP11441 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBL4AP11441 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
UBL4AP11441 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.71■■□□□ 1.07
UBL4AP11441 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBL4AP11441 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
UBL4AP11441 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBL4AP11441 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
UBL4AP11441 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBL4AP11441 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBL4AP11441 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.7■■□□□ 1.06
UBL4AP11441 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBL4AP11441 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.69■■□□□ 1.06
UBL4AP11441 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBL4AP11441 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.69■■□□□ 1.06
UBL4AP11441 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
UBL4AP11441 RPS2P7-201ENST00000447334 885 ntBASIC21.69■■□□□ 1.06
UBL4AP11441 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.69■■□□□ 1.06
UBL4AP11441 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.69■■□□□ 1.06
UBL4AP11441 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBL4AP11441 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.69■■□□□ 1.06
UBL4AP11441 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
UBL4AP11441 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBL4AP11441 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.68■■□□□ 1.06
UBL4AP11441 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBL4AP11441 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBL4AP11441 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBL4AP11441 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBL4AP11441 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
UBL4AP11441 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBL4AP11441 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBL4AP11441 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBL4AP11441 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
UBL4AP11441 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
UBL4AP11441 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBL4AP11441 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBL4AP11441 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBL4AP11441 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
UBL4AP11441 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBL4AP11441 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
UBL4AP11441 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
UBL4AP11441 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBL4AP11441 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBL4AP11441 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBL4AP11441 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.65■■□□□ 1.06
UBL4AP11441 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBL4AP11441 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
UBL4AP11441 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBL4AP11441 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.65■■□□□ 1.06
UBL4AP11441 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBL4AP11441 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBL4AP11441 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBL4AP11441 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
UBL4AP11441 AC087393.1-201ENST00000582896 145 ntBASIC21.64■■□□□ 1.05
UBL4AP11441 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBL4AP11441 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
UBL4AP11441 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.64■■□□□ 1.05
UBL4AP11441 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBL4AP11441 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
UBL4AP11441 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBL4AP11441 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.63■■□□□ 1.05
UBL4AP11441 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBL4AP11441 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBL4AP11441 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBL4AP11441 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBL4AP11441 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBL4AP11441 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBL4AP11441 AC138932.3-201ENST00000567634 1902 ntBASIC21.63■■□□□ 1.05
UBL4AP11441 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
UBL4AP11441 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBL4AP11441 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
UBL4AP11441 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBL4AP11441 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBL4AP11441 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBL4AP11441 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.62■■□□□ 1.05
UBL4AP11441 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.62■■□□□ 1.05
UBL4AP11441 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBL4AP11441 FOXO3B-201ENST00000395675 1928 ntBASIC21.62■■□□□ 1.05
UBL4AP11441 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBL4AP11441 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms