Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 AC008813.1-201ENST00000536597 885 ntBASIC17.41■□□□□ 0.38
SMIM17P0DL12 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SMIM17P0DL12 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM17P0DL12 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.41■□□□□ 0.38
SMIM17P0DL12 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM17P0DL12 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM17P0DL12 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM17P0DL12 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM17P0DL12 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.4■□□□□ 0.38
SMIM17P0DL12 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SMIM17P0DL12 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMIM17P0DL12 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.4■□□□□ 0.38
SMIM17P0DL12 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.4■□□□□ 0.38
SMIM17P0DL12 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.4■□□□□ 0.38
SMIM17P0DL12 AC138932.3-201ENST00000567634 1902 ntBASIC17.4■□□□□ 0.38
SMIM17P0DL12 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SMIM17P0DL12 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMIM17P0DL12 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SMIM17P0DL12 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM17P0DL12 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SMIM17P0DL12 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.39■□□□□ 0.38
SMIM17P0DL12 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM17P0DL12 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.39■□□□□ 0.37
SMIM17P0DL12 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM17P0DL12 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM17P0DL12 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM17P0DL12 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM17P0DL12 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.38■□□□□ 0.37
SMIM17P0DL12 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
SMIM17P0DL12 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.38■□□□□ 0.37
SMIM17P0DL12 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM17P0DL12 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM17P0DL12 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SMIM17P0DL12 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.38■□□□□ 0.37
SMIM17P0DL12 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM17P0DL12 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM17P0DL12 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM17P0DL12 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM17P0DL12 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM17P0DL12 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.37■□□□□ 0.37
SMIM17P0DL12 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM17P0DL12 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.37■□□□□ 0.37
SMIM17P0DL12 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM17P0DL12 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM17P0DL12 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SMIM17P0DL12 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM17P0DL12 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM17P0DL12 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM17P0DL12 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SMIM17P0DL12 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMIM17P0DL12 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM17P0DL12 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM17P0DL12 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM17P0DL12 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM17P0DL12 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM17P0DL12 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM17P0DL12 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SMIM17P0DL12 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM17P0DL12 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM17P0DL12 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM17P0DL12 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMIM17P0DL12 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM17P0DL12 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM17P0DL12 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM17P0DL12 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM17P0DL12 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM17P0DL12 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM17P0DL12 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM17P0DL12 AC096887.2-201ENST00000623443 1957 ntBASIC17.35■□□□□ 0.37
SMIM17P0DL12 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.35■□□□□ 0.37
SMIM17P0DL12 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM17P0DL12 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM17P0DL12 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM17P0DL12 LINC01971-201ENST00000617888 1048 ntBASIC17.34■□□□□ 0.37
SMIM17P0DL12 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.33■□□□□ 0.37
SMIM17P0DL12 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMIM17P0DL12 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.33■□□□□ 0.37
SMIM17P0DL12 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
SMIM17P0DL12 MIR219A2-201ENST00000608502 1504 ntBASIC17.33■□□□□ 0.37
SMIM17P0DL12 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM17P0DL12 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM17P0DL12 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SMIM17P0DL12 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.33■□□□□ 0.36
SMIM17P0DL12 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM17P0DL12 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SMIM17P0DL12 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM17P0DL12 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM17P0DL12 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM17P0DL12 AL359258.2-201ENST00000564063 1566 ntBASIC17.32■□□□□ 0.36
SMIM17P0DL12 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM17P0DL12 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SMIM17P0DL12 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM17P0DL12 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM17P0DL12 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.32■□□□□ 0.36
SMIM17P0DL12 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.32■□□□□ 0.36
SMIM17P0DL12 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM17P0DL12 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM17P0DL12 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM17P0DL12 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.32■□□□□ 0.36
SMIM17P0DL12 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms