Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
GGPS1O95749 UNC93B8-201ENST00000511903 705 ntBASIC26.67■■□□□ 1.86
GGPS1O95749 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
GGPS1O95749 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
GGPS1O95749 AC021242.3-201ENST00000607598 1377 ntBASIC26.67■■□□□ 1.86
GGPS1O95749 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.66■■□□□ 1.86
GGPS1O95749 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
GGPS1O95749 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
GGPS1O95749 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
GGPS1O95749 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.66■■□□□ 1.86
GGPS1O95749 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
GGPS1O95749 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.66■■□□□ 1.86
GGPS1O95749 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
GGPS1O95749 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
GGPS1O95749 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
GGPS1O95749 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.65■■□□□ 1.86
GGPS1O95749 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.65■■□□□ 1.86
GGPS1O95749 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
GGPS1O95749 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
GGPS1O95749 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
GGPS1O95749 AC096887.2-201ENST00000623443 1957 ntBASIC26.64■■□□□ 1.86
GGPS1O95749 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.64■■□□□ 1.86
GGPS1O95749 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
GGPS1O95749 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.64■■□□□ 1.86
GGPS1O95749 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
GGPS1O95749 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.64■■□□□ 1.86
GGPS1O95749 AC011551.1-201ENST00000614101 683 ntBASIC26.64■■□□□ 1.86
GGPS1O95749 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
GGPS1O95749 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.64■■□□□ 1.85
GGPS1O95749 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
GGPS1O95749 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
GGPS1O95749 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
GGPS1O95749 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.63■■□□□ 1.85
GGPS1O95749 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
GGPS1O95749 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.63■■□□□ 1.85
GGPS1O95749 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.63■■□□□ 1.85
GGPS1O95749 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
GGPS1O95749 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.62■■□□□ 1.85
GGPS1O95749 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
GGPS1O95749 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.62■■□□□ 1.85
GGPS1O95749 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.62■■□□□ 1.85
GGPS1O95749 FOXO3B-201ENST00000395675 1928 ntBASIC26.62■■□□□ 1.85
GGPS1O95749 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
GGPS1O95749 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.62■■□□□ 1.85
GGPS1O95749 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
GGPS1O95749 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
GGPS1O95749 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.61■■□□□ 1.85
GGPS1O95749 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
GGPS1O95749 TSPY9P-201ENST00000440215 945 ntBASIC26.61■■□□□ 1.85
GGPS1O95749 TSPY11P-201ENST00000442607 1045 ntBASIC26.61■■□□□ 1.85
GGPS1O95749 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
GGPS1O95749 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.6■■□□□ 1.85
GGPS1O95749 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.6■■□□□ 1.85
GGPS1O95749 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.6■■□□□ 1.85
GGPS1O95749 KRT16P3-201ENST00000439127 1283 ntBASIC26.6■■□□□ 1.85
GGPS1O95749 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
GGPS1O95749 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.59■■□□□ 1.85
GGPS1O95749 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.59■■□□□ 1.85
GGPS1O95749 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.59■■□□□ 1.85
GGPS1O95749 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.59■■□□□ 1.85
GGPS1O95749 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
GGPS1O95749 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.58■■□□□ 1.85
GGPS1O95749 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.58■■□□□ 1.85
GGPS1O95749 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.58■■□□□ 1.85
GGPS1O95749 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.58■■□□□ 1.85
GGPS1O95749 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
GGPS1O95749 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
GGPS1O95749 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
GGPS1O95749 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
GGPS1O95749 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
GGPS1O95749 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.57■■□□□ 1.84
GGPS1O95749 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
GGPS1O95749 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.57■■□□□ 1.84
GGPS1O95749 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.57■■□□□ 1.84
GGPS1O95749 AC092028.1-203ENST00000608262 953 ntBASIC26.57■■□□□ 1.84
GGPS1O95749 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
GGPS1O95749 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
GGPS1O95749 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.57■■□□□ 1.84
GGPS1O95749 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
GGPS1O95749 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.56■■□□□ 1.84
GGPS1O95749 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
GGPS1O95749 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.56■■□□□ 1.84
GGPS1O95749 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
GGPS1O95749 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.56■■□□□ 1.84
GGPS1O95749 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
GGPS1O95749 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
GGPS1O95749 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
GGPS1O95749 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.55■■□□□ 1.84
GGPS1O95749 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
GGPS1O95749 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
GGPS1O95749 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
GGPS1O95749 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.55■■□□□ 1.84
GGPS1O95749 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.55■■□□□ 1.84
GGPS1O95749 AC097639.1-201ENST00000565519 1891 ntBASIC26.55■■□□□ 1.84
GGPS1O95749 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
GGPS1O95749 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
GGPS1O95749 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.54■■□□□ 1.84
GGPS1O95749 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.54■■□□□ 1.84
GGPS1O95749 AC010501.1-201ENST00000606270 1962 ntBASIC26.54■■□□□ 1.84
GGPS1O95749 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms