Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 MIR6724-4-201ENST00000617390 92 ntBASIC25.42■■□□□ 1.66
CSPG5O95196 MIR6724-3-201ENST00000622482 92 ntBASIC25.42■■□□□ 1.66
CSPG5O95196 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CSPG5O95196 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CSPG5O95196 MIR3621-201ENST00000580529 85 ntBASIC25.41■■□□□ 1.66
CSPG5O95196 AL356740.2-201ENST00000601559 647 ntBASIC25.41■■□□□ 1.66
CSPG5O95196 AC005837.3-201ENST00000612163 286 ntBASIC25.41■■□□□ 1.66
CSPG5O95196 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.41■■□□□ 1.66
CSPG5O95196 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CSPG5O95196 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CSPG5O95196 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.4■■□□□ 1.66
CSPG5O95196 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CSPG5O95196 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.4■■□□□ 1.66
CSPG5O95196 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CSPG5O95196 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.4■■□□□ 1.66
CSPG5O95196 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.4■■□□□ 1.66
CSPG5O95196 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.4■■□□□ 1.66
CSPG5O95196 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.4■■□□□ 1.66
CSPG5O95196 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CSPG5O95196 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CSPG5O95196 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CSPG5O95196 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CSPG5O95196 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.39■■□□□ 1.66
CSPG5O95196 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CSPG5O95196 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.38■■□□□ 1.65
CSPG5O95196 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CSPG5O95196 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
CSPG5O95196 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CSPG5O95196 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CSPG5O95196 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.37■■□□□ 1.65
CSPG5O95196 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CSPG5O95196 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CSPG5O95196 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.37■■□□□ 1.65
CSPG5O95196 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CSPG5O95196 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSPG5O95196 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
CSPG5O95196 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CSPG5O95196 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSPG5O95196 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.36■■□□□ 1.65
CSPG5O95196 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.36■■□□□ 1.65
CSPG5O95196 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.36■■□□□ 1.65
CSPG5O95196 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
CSPG5O95196 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CSPG5O95196 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSPG5O95196 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.35■■□□□ 1.65
CSPG5O95196 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.35■■□□□ 1.65
CSPG5O95196 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CSPG5O95196 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.34■■□□□ 1.65
CSPG5O95196 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CSPG5O95196 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.34■■□□□ 1.65
CSPG5O95196 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.34■■□□□ 1.65
CSPG5O95196 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CSPG5O95196 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CSPG5O95196 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.33■■□□□ 1.65
CSPG5O95196 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.33■■□□□ 1.65
CSPG5O95196 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSPG5O95196 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSPG5O95196 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.33■■□□□ 1.65
CSPG5O95196 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.33■■□□□ 1.65
CSPG5O95196 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CSPG5O95196 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
CSPG5O95196 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSPG5O95196 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.32■■□□□ 1.64
CSPG5O95196 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.32■■□□□ 1.64
CSPG5O95196 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSPG5O95196 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CSPG5O95196 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CSPG5O95196 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CSPG5O95196 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.31■■□□□ 1.64
CSPG5O95196 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.31■■□□□ 1.64
CSPG5O95196 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.31■■□□□ 1.64
CSPG5O95196 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.3■■□□□ 1.64
CSPG5O95196 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSPG5O95196 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CSPG5O95196 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CSPG5O95196 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSPG5O95196 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.29■■□□□ 1.64
CSPG5O95196 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.29■■□□□ 1.64
CSPG5O95196 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSPG5O95196 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.28■■□□□ 1.64
CSPG5O95196 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.28■■□□□ 1.64
CSPG5O95196 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CSPG5O95196 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CSPG5O95196 AL512631.2-201ENST00000604634 923 ntBASIC25.28■■□□□ 1.64
CSPG5O95196 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CSPG5O95196 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CSPG5O95196 ZNRF2P3-201ENST00000424200 374 ntBASIC25.27■■□□□ 1.64
CSPG5O95196 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.27■■□□□ 1.64
CSPG5O95196 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
CSPG5O95196 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.27■■□□□ 1.64
CSPG5O95196 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CSPG5O95196 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CSPG5O95196 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CSPG5O95196 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CSPG5O95196 PBX2P1-201ENST00000493219 1291 ntBASIC25.25■■□□□ 1.63
CSPG5O95196 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CSPG5O95196 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
CSPG5O95196 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CSPG5O95196 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CSPG5O95196 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms