Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT33AO76009 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT33AO76009 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT33AO76009 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
KRT33AO76009 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
KRT33AO76009 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT33AO76009 AC010501.1-201ENST00000606270 1962 ntBASIC21.21■□□□□ 0.99
KRT33AO76009 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.21■□□□□ 0.99
KRT33AO76009 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
KRT33AO76009 DUX4L18-201ENST00000553347 1267 ntBASIC21.21■□□□□ 0.99
KRT33AO76009 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT33AO76009 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
KRT33AO76009 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
KRT33AO76009 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT33AO76009 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT33AO76009 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT33AO76009 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.19■□□□□ 0.98
KRT33AO76009 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
KRT33AO76009 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT33AO76009 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.19■□□□□ 0.98
KRT33AO76009 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT33AO76009 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT33AO76009 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT33AO76009 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT33AO76009 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT33AO76009 TSPY13P-201ENST00000338964 914 ntBASIC21.18■□□□□ 0.98
KRT33AO76009 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT33AO76009 ATP5G2P3-201ENST00000429083 425 ntBASIC21.18■□□□□ 0.98
KRT33AO76009 SPCS2P3-201ENST00000500401 656 ntBASIC21.18■□□□□ 0.98
KRT33AO76009 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT33AO76009 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT33AO76009 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT33AO76009 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT33AO76009 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT33AO76009 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT33AO76009 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT33AO76009 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT33AO76009 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT33AO76009 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT33AO76009 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT33AO76009 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.17■□□□□ 0.98
KRT33AO76009 AC004987.1-201ENST00000428627 508 ntBASIC21.17■□□□□ 0.98
KRT33AO76009 BHLHE23-202ENST00000612929 1109 ntBASIC21.17■□□□□ 0.98
KRT33AO76009 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT33AO76009 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT33AO76009 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KRT33AO76009 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT33AO76009 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT33AO76009 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT33AO76009 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT33AO76009 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT33AO76009 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT33AO76009 AC139795.1-202ENST00000500444 432 ntBASIC21.16■□□□□ 0.98
KRT33AO76009 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT33AO76009 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT33AO76009 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT33AO76009 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT33AO76009 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT33AO76009 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KRT33AO76009 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT33AO76009 AL033527.3-201ENST00000566366 1196 ntBASIC21.15■□□□□ 0.98
KRT33AO76009 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
KRT33AO76009 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT33AO76009 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.14■□□□□ 0.98
KRT33AO76009 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT33AO76009 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT33AO76009 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.14■□□□□ 0.97
KRT33AO76009 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
KRT33AO76009 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT33AO76009 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
KRT33AO76009 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT33AO76009 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT33AO76009 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
KRT33AO76009 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
KRT33AO76009 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT33AO76009 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT33AO76009 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT33AO76009 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
KRT33AO76009 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT33AO76009 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT33AO76009 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT33AO76009 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT33AO76009 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT33AO76009 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT33AO76009 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
KRT33AO76009 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT33AO76009 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT33AO76009 AC096887.2-201ENST00000623443 1957 ntBASIC21.11■□□□□ 0.97
KRT33AO76009 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT33AO76009 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT33AO76009 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT33AO76009 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT33AO76009 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT33AO76009 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT33AO76009 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT33AO76009 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
KRT33AO76009 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
KRT33AO76009 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT33AO76009 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT33AO76009 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms