Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NDUFS3O75489 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.48■■□□□ 1.35
NDUFS3O75489 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
NDUFS3O75489 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NDUFS3O75489 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NDUFS3O75489 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
NDUFS3O75489 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NDUFS3O75489 RPS2P7-201ENST00000447334 885 ntBASIC23.47■■□□□ 1.35
NDUFS3O75489 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.47■■□□□ 1.35
NDUFS3O75489 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
NDUFS3O75489 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.47■■□□□ 1.35
NDUFS3O75489 AC129492.7-201ENST00000622992 756 ntBASIC23.47■■□□□ 1.35
NDUFS3O75489 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
NDUFS3O75489 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
NDUFS3O75489 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NDUFS3O75489 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
NDUFS3O75489 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.47■■□□□ 1.35
NDUFS3O75489 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
NDUFS3O75489 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NDUFS3O75489 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
NDUFS3O75489 NTF6A-201ENST00000591175 560 ntBASIC23.46■■□□□ 1.35
NDUFS3O75489 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
NDUFS3O75489 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
NDUFS3O75489 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
NDUFS3O75489 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
NDUFS3O75489 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.45■■□□□ 1.35
NDUFS3O75489 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
NDUFS3O75489 AP003733.4-201ENST00000623785 1697 ntBASIC23.45■■□□□ 1.34
NDUFS3O75489 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
NDUFS3O75489 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
NDUFS3O75489 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
NDUFS3O75489 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
NDUFS3O75489 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
NDUFS3O75489 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.44■■□□□ 1.34
NDUFS3O75489 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.44■■□□□ 1.34
NDUFS3O75489 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NDUFS3O75489 FOXO3B-201ENST00000395675 1928 ntBASIC23.43■■□□□ 1.34
NDUFS3O75489 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.43■■□□□ 1.34
NDUFS3O75489 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NDUFS3O75489 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NDUFS3O75489 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NDUFS3O75489 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NDUFS3O75489 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
NDUFS3O75489 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.42■■□□□ 1.34
NDUFS3O75489 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.42■■□□□ 1.34
NDUFS3O75489 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.42■■□□□ 1.34
NDUFS3O75489 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
NDUFS3O75489 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NDUFS3O75489 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.41■■□□□ 1.34
NDUFS3O75489 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
NDUFS3O75489 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NDUFS3O75489 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NDUFS3O75489 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NDUFS3O75489 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NDUFS3O75489 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.41■■□□□ 1.34
NDUFS3O75489 AC087393.1-201ENST00000582896 145 ntBASIC23.41■■□□□ 1.34
NDUFS3O75489 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
NDUFS3O75489 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NDUFS3O75489 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NDUFS3O75489 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.4■■□□□ 1.34
NDUFS3O75489 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NDUFS3O75489 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
NDUFS3O75489 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NDUFS3O75489 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.39■■□□□ 1.33
NDUFS3O75489 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NDUFS3O75489 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
NDUFS3O75489 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NDUFS3O75489 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.38■■□□□ 1.33
NDUFS3O75489 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NDUFS3O75489 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NDUFS3O75489 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
NDUFS3O75489 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NDUFS3O75489 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
NDUFS3O75489 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NDUFS3O75489 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
NDUFS3O75489 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NDUFS3O75489 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NDUFS3O75489 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NDUFS3O75489 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS3O75489 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.36■■□□□ 1.33
NDUFS3O75489 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS3O75489 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS3O75489 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS3O75489 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.36■■□□□ 1.33
NDUFS3O75489 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.36■■□□□ 1.33
NDUFS3O75489 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.36■■□□□ 1.33
NDUFS3O75489 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.36■■□□□ 1.33
NDUFS3O75489 AL139125.2-201ENST00000623134 1869 ntBASIC23.36■■□□□ 1.33
NDUFS3O75489 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS3O75489 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS3O75489 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS3O75489 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS3O75489 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS3O75489 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS3O75489 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS3O75489 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.35■■□□□ 1.33
NDUFS3O75489 DUX4L18-201ENST00000553347 1267 ntBASIC23.35■■□□□ 1.33
NDUFS3O75489 MIR6089-201ENST00000616698 64 ntBASIC23.35■■□□□ 1.33
NDUFS3O75489 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
NDUFS3O75489 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms