Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD2O60906 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD2O60906 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD2O60906 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.65■□□□□ 0.9
SMPD2O60906 KRT18P10-201ENST00000388836 1287 ntBASIC20.65■□□□□ 0.9
SMPD2O60906 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMPD2O60906 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD2O60906 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD2O60906 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD2O60906 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD2O60906 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD2O60906 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD2O60906 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SMPD2O60906 LONRF2P2-201ENST00000439212 571 ntBASIC20.64■□□□□ 0.89
SMPD2O60906 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.64■□□□□ 0.89
SMPD2O60906 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.64■□□□□ 0.89
SMPD2O60906 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.64■□□□□ 0.89
SMPD2O60906 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD2O60906 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD2O60906 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD2O60906 BX664725.1-201ENST00000438252 379 ntBASIC20.63■□□□□ 0.89
SMPD2O60906 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD2O60906 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.63■□□□□ 0.89
SMPD2O60906 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.63■□□□□ 0.89
SMPD2O60906 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD2O60906 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.63■□□□□ 0.89
SMPD2O60906 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.62■□□□□ 0.89
SMPD2O60906 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMPD2O60906 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMPD2O60906 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMPD2O60906 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMPD2O60906 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMPD2O60906 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMPD2O60906 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.62■□□□□ 0.89
SMPD2O60906 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMPD2O60906 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMPD2O60906 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SMPD2O60906 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMPD2O60906 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.61■□□□□ 0.89
SMPD2O60906 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMPD2O60906 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SMPD2O60906 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.6■□□□□ 0.89
SMPD2O60906 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMPD2O60906 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMPD2O60906 MIR4787-201ENST00000607364 84 ntBASIC20.6■□□□□ 0.89
SMPD2O60906 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.6■□□□□ 0.89
SMPD2O60906 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMPD2O60906 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMPD2O60906 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMPD2O60906 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.59■□□□□ 0.89
SMPD2O60906 AC097639.1-201ENST00000565519 1891 ntBASIC20.59■□□□□ 0.89
SMPD2O60906 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMPD2O60906 MIR935-201ENST00000401179 91 ntBASIC20.59■□□□□ 0.89
SMPD2O60906 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMPD2O60906 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SMPD2O60906 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.59■□□□□ 0.89
SMPD2O60906 AC022616.5-201ENST00000518796 181 ntBASIC20.59■□□□□ 0.89
SMPD2O60906 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMPD2O60906 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.59■□□□□ 0.89
SMPD2O60906 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.58■□□□□ 0.89
SMPD2O60906 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SMPD2O60906 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SMPD2O60906 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.58■□□□□ 0.89
SMPD2O60906 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.58■□□□□ 0.89
SMPD2O60906 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.58■□□□□ 0.88
SMPD2O60906 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMPD2O60906 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMPD2O60906 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD2O60906 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD2O60906 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD2O60906 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD2O60906 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.57■□□□□ 0.88
SMPD2O60906 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.57■□□□□ 0.88
SMPD2O60906 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD2O60906 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD2O60906 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMPD2O60906 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SMPD2O60906 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.56■□□□□ 0.88
SMPD2O60906 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD2O60906 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SMPD2O60906 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SMPD2O60906 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD2O60906 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD2O60906 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD2O60906 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD2O60906 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.55■□□□□ 0.88
SMPD2O60906 KRT16P3-201ENST00000439127 1283 ntBASIC20.55■□□□□ 0.88
SMPD2O60906 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD2O60906 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD2O60906 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
SMPD2O60906 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.54■□□□□ 0.88
SMPD2O60906 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD2O60906 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SMPD2O60906 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.54■□□□□ 0.88
SMPD2O60906 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD2O60906 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD2O60906 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD2O60906 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD2O60906 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SMPD2O60906 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms