Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSX5O60225 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.09■□□□□ 0.81
SSX5O60225 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SSX5O60225 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SSX5O60225 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SSX5O60225 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SSX5O60225 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX5O60225 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.07■□□□□ 0.8
SSX5O60225 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX5O60225 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX5O60225 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX5O60225 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SSX5O60225 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX5O60225 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.06■□□□□ 0.8
SSX5O60225 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSX5O60225 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.06■□□□□ 0.8
SSX5O60225 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX5O60225 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSX5O60225 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX5O60225 AC012676.1-201ENST00000574705 1949 ntBASIC20.06■□□□□ 0.8
SSX5O60225 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX5O60225 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX5O60225 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SSX5O60225 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX5O60225 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX5O60225 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SSX5O60225 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SSX5O60225 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX5O60225 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.05■□□□□ 0.8
SSX5O60225 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.05■□□□□ 0.8
SSX5O60225 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SSX5O60225 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SSX5O60225 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX5O60225 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX5O60225 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.04■□□□□ 0.8
SSX5O60225 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSX5O60225 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SSX5O60225 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX5O60225 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX5O60225 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX5O60225 AC068473.5-201ENST00000616428 2072 ntBASIC20.04■□□□□ 0.8
SSX5O60225 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.03■□□□□ 0.8
SSX5O60225 DUX4L11-201ENST00000611504 1267 ntBASIC20.03■□□□□ 0.8
SSX5O60225 DUX4L12-201ENST00000614593 1267 ntBASIC20.03■□□□□ 0.8
SSX5O60225 DUX4L14-201ENST00000621227 1267 ntBASIC20.03■□□□□ 0.8
SSX5O60225 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX5O60225 AC141586.4-201ENST00000624558 1573 ntBASIC20.03■□□□□ 0.8
SSX5O60225 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX5O60225 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX5O60225 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSX5O60225 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX5O60225 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX5O60225 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX5O60225 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX5O60225 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.02■□□□□ 0.8
SSX5O60225 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SSX5O60225 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX5O60225 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.02■□□□□ 0.8
SSX5O60225 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSX5O60225 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SSX5O60225 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SSX5O60225 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSX5O60225 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSX5O60225 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SSX5O60225 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX5O60225 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSX5O60225 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SSX5O60225 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX5O60225 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX5O60225 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.01■□□□□ 0.79
SSX5O60225 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.01■□□□□ 0.79
SSX5O60225 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSX5O60225 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX5O60225 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX5O60225 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX5O60225 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX5O60225 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SSX5O60225 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX5O60225 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SSX5O60225 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX5O60225 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20■□□□□ 0.79
SSX5O60225 HES6-205ENST00000409356 528 ntTSL 2 BASIC20■□□□□ 0.79
SSX5O60225 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20■□□□□ 0.79
SSX5O60225 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20■□□□□ 0.79
SSX5O60225 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSX5O60225 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SSX5O60225 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX5O60225 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSX5O60225 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.99■□□□□ 0.79
SSX5O60225 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SSX5O60225 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SSX5O60225 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SSX5O60225 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX5O60225 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.99■□□□□ 0.79
SSX5O60225 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SSX5O60225 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX5O60225 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.99■□□□□ 0.79
SSX5O60225 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX5O60225 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX5O60225 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms