Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC004812.2-201ENST00000611079 2094 ntBASIC18.27■□□□□ 0.51
PDE6DO43924 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6DO43924 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6DO43924 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6DO43924 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6DO43924 MIR6090-201ENST00000622481 60 ntBASIC18.26■□□□□ 0.51
PDE6DO43924 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6DO43924 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6DO43924 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.26■□□□□ 0.51
PDE6DO43924 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6DO43924 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6DO43924 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PDE6DO43924 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDE6DO43924 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.25■□□□□ 0.51
PDE6DO43924 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
PDE6DO43924 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDE6DO43924 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6DO43924 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6DO43924 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6DO43924 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6DO43924 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6DO43924 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDE6DO43924 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6DO43924 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6DO43924 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDE6DO43924 PKD1P6-201ENST00000343738 4769 ntBASIC18.23■□□□□ 0.51
PDE6DO43924 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.23■□□□□ 0.51
PDE6DO43924 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PDE6DO43924 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6DO43924 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6DO43924 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PDE6DO43924 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6DO43924 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PDE6DO43924 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6DO43924 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PDE6DO43924 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6DO43924 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
PDE6DO43924 C9orf163-202ENST00000624034 2573 ntBASIC18.22■□□□□ 0.51
PDE6DO43924 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6DO43924 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6DO43924 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6DO43924 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6DO43924 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6DO43924 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.21■□□□□ 0.51
PDE6DO43924 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.21■□□□□ 0.51
PDE6DO43924 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6DO43924 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
PDE6DO43924 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
PDE6DO43924 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
PDE6DO43924 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6DO43924 AC005559.1-201ENST00000589661 871 ntBASIC18.2■□□□□ 0.5
PDE6DO43924 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6DO43924 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6DO43924 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDE6DO43924 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6DO43924 ABCB10P4-201ENST00000566803 2184 ntBASIC18.2■□□□□ 0.5
PDE6DO43924 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6DO43924 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6DO43924 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6DO43924 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6DO43924 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6DO43924 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE6DO43924 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6DO43924 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6DO43924 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6DO43924 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6DO43924 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE6DO43924 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDE6DO43924 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6DO43924 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6DO43924 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6DO43924 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6DO43924 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6DO43924 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6DO43924 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDE6DO43924 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PDE6DO43924 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6DO43924 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.17■□□□□ 0.5
PDE6DO43924 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PDE6DO43924 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6DO43924 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6DO43924 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.16■□□□□ 0.5
PDE6DO43924 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.16■□□□□ 0.5
PDE6DO43924 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.16■□□□□ 0.5
PDE6DO43924 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6DO43924 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6DO43924 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.16■□□□□ 0.5
PDE6DO43924 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.16■□□□□ 0.5
PDE6DO43924 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.16■□□□□ 0.5
PDE6DO43924 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms