Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
KCNQ3O43525 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
KCNQ3O43525 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
KCNQ3O43525 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.68■■■□□ 2.5
KCNQ3O43525 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.68■■■□□ 2.5
KCNQ3O43525 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
KCNQ3O43525 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
KCNQ3O43525 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.67■■■□□ 2.5
KCNQ3O43525 TSPY9P-201ENST00000440215 945 ntBASIC30.67■■■□□ 2.5
KCNQ3O43525 TSPY11P-201ENST00000442607 1045 ntBASIC30.67■■■□□ 2.5
KCNQ3O43525 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.67■■■□□ 2.5
KCNQ3O43525 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.67■■■□□ 2.5
KCNQ3O43525 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.67■■■□□ 2.5
KCNQ3O43525 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
KCNQ3O43525 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.66■■■□□ 2.5
KCNQ3O43525 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
KCNQ3O43525 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
KCNQ3O43525 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
KCNQ3O43525 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.65■■■□□ 2.5
KCNQ3O43525 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
KCNQ3O43525 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
KCNQ3O43525 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.65■■■□□ 2.5
KCNQ3O43525 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
KCNQ3O43525 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
KCNQ3O43525 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
KCNQ3O43525 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
KCNQ3O43525 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.64■■■□□ 2.5
KCNQ3O43525 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.64■■■□□ 2.5
KCNQ3O43525 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.64■■■□□ 2.5
KCNQ3O43525 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
KCNQ3O43525 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.63■■■□□ 2.49
KCNQ3O43525 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.63■■■□□ 2.49
KCNQ3O43525 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.63■■■□□ 2.49
KCNQ3O43525 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
KCNQ3O43525 FOXO3B-201ENST00000395675 1928 ntBASIC30.63■■■□□ 2.49
KCNQ3O43525 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
KCNQ3O43525 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.63■■■□□ 2.49
KCNQ3O43525 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
KCNQ3O43525 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
KCNQ3O43525 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.62■■■□□ 2.49
KCNQ3O43525 AC092028.1-203ENST00000608262 953 ntBASIC30.62■■■□□ 2.49
KCNQ3O43525 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.62■■■□□ 2.49
KCNQ3O43525 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
KCNQ3O43525 KRT16P3-201ENST00000439127 1283 ntBASIC30.61■■■□□ 2.49
KCNQ3O43525 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
KCNQ3O43525 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.61■■■□□ 2.49
KCNQ3O43525 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.61■■■□□ 2.49
KCNQ3O43525 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
KCNQ3O43525 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
KCNQ3O43525 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.61■■■□□ 2.49
KCNQ3O43525 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
KCNQ3O43525 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
KCNQ3O43525 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
KCNQ3O43525 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.6■■■□□ 2.49
KCNQ3O43525 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.6■■■□□ 2.49
KCNQ3O43525 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
KCNQ3O43525 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
KCNQ3O43525 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
KCNQ3O43525 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.58■■■□□ 2.49
KCNQ3O43525 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
KCNQ3O43525 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
KCNQ3O43525 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.57■■■□□ 2.48
KCNQ3O43525 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
KCNQ3O43525 AC011551.1-201ENST00000614101 683 ntBASIC30.57■■■□□ 2.48
KCNQ3O43525 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
KCNQ3O43525 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.56■■■□□ 2.48
KCNQ3O43525 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
KCNQ3O43525 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
KCNQ3O43525 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.56■■■□□ 2.48
KCNQ3O43525 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.56■■■□□ 2.48
KCNQ3O43525 AF131216.4-201ENST00000638924 1588 ntBASIC30.56■■■□□ 2.48
KCNQ3O43525 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
KCNQ3O43525 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
KCNQ3O43525 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
KCNQ3O43525 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.55■■■□□ 2.48
KCNQ3O43525 AC010501.1-201ENST00000606270 1962 ntBASIC30.54■■■□□ 2.48
KCNQ3O43525 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KCNQ3O43525 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KCNQ3O43525 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.54■■■□□ 2.48
KCNQ3O43525 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
KCNQ3O43525 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.54■■■□□ 2.48
KCNQ3O43525 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
KCNQ3O43525 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KCNQ3O43525 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
KCNQ3O43525 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
KCNQ3O43525 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
KCNQ3O43525 AC097639.1-201ENST00000565519 1891 ntBASIC30.53■■■□□ 2.48
KCNQ3O43525 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
KCNQ3O43525 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
KCNQ3O43525 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
KCNQ3O43525 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.52■■■□□ 2.48
KCNQ3O43525 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
KCNQ3O43525 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.52■■■□□ 2.48
KCNQ3O43525 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
KCNQ3O43525 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
KCNQ3O43525 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
KCNQ3O43525 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
KCNQ3O43525 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.5■■■□□ 2.47
KCNQ3O43525 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.5■■■□□ 2.47
KCNQ3O43525 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms