Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN4O14817 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.52■□□□□ 0.72
TSPAN4O14817 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.52■□□□□ 0.72
TSPAN4O14817 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN4O14817 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TSPAN4O14817 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.51■□□□□ 0.71
TSPAN4O14817 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN4O14817 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN4O14817 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.51■□□□□ 0.71
TSPAN4O14817 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.51■□□□□ 0.71
TSPAN4O14817 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TSPAN4O14817 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TSPAN4O14817 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TSPAN4O14817 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN4O14817 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN4O14817 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN4O14817 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN4O14817 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN4O14817 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN4O14817 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN4O14817 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.5■□□□□ 0.71
TSPAN4O14817 AL117328.2-201ENST00000624617 1940 ntBASIC19.5■□□□□ 0.71
TSPAN4O14817 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN4O14817 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TSPAN4O14817 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN4O14817 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN4O14817 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TSPAN4O14817 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN4O14817 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN4O14817 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.49■□□□□ 0.71
TSPAN4O14817 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.49■□□□□ 0.71
TSPAN4O14817 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN4O14817 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TSPAN4O14817 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TSPAN4O14817 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN4O14817 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN4O14817 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN4O14817 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN4O14817 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN4O14817 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN4O14817 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TSPAN4O14817 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN4O14817 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN4O14817 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN4O14817 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN4O14817 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN4O14817 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN4O14817 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN4O14817 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TSPAN4O14817 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN4O14817 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.47■□□□□ 0.71
TSPAN4O14817 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN4O14817 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN4O14817 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TSPAN4O14817 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN4O14817 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.47■□□□□ 0.71
TSPAN4O14817 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN4O14817 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.47■□□□□ 0.71
TSPAN4O14817 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN4O14817 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN4O14817 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN4O14817 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.46■□□□□ 0.71
TSPAN4O14817 DUSP8P5-201ENST00000422884 1815 ntBASIC19.46■□□□□ 0.71
TSPAN4O14817 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TSPAN4O14817 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TSPAN4O14817 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN4O14817 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN4O14817 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.46■□□□□ 0.71
TSPAN4O14817 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TSPAN4O14817 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN4O14817 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN4O14817 LINC00273-201ENST00000539813 1452 ntBASIC19.46■□□□□ 0.71
TSPAN4O14817 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN4O14817 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN4O14817 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN4O14817 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN4O14817 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN4O14817 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN4O14817 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN4O14817 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN4O14817 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN4O14817 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.45■□□□□ 0.7
TSPAN4O14817 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN4O14817 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TSPAN4O14817 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TSPAN4O14817 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN4O14817 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN4O14817 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN4O14817 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN4O14817 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TSPAN4O14817 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN4O14817 ABHD17AP4-201ENST00000411545 909 ntBASIC19.44■□□□□ 0.7
TSPAN4O14817 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.44■□□□□ 0.7
TSPAN4O14817 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TSPAN4O14817 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN4O14817 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TSPAN4O14817 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN4O14817 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN4O14817 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.43■□□□□ 0.7
TSPAN4O14817 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms