Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTCAO00442 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTCAO00442 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTCAO00442 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RTCAO00442 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.52■■□□□ 1.2
RTCAO00442 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.52■■□□□ 1.2
RTCAO00442 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RTCAO00442 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTCAO00442 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTCAO00442 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTCAO00442 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.51■■□□□ 1.19
RTCAO00442 AC135731.1-201ENST00000569415 2548 ntBASIC22.51■■□□□ 1.19
RTCAO00442 ATP5G2P3-201ENST00000429083 425 ntBASIC22.51■■□□□ 1.19
RTCAO00442 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
RTCAO00442 AC087393.1-201ENST00000582896 145 ntBASIC22.51■■□□□ 1.19
RTCAO00442 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.51■■□□□ 1.19
RTCAO00442 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RTCAO00442 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
RTCAO00442 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.5■■□□□ 1.19
RTCAO00442 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTCAO00442 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTCAO00442 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTCAO00442 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.49■■□□□ 1.19
RTCAO00442 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.49■■□□□ 1.19
RTCAO00442 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RTCAO00442 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RTCAO00442 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTCAO00442 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RTCAO00442 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCAO00442 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCAO00442 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RTCAO00442 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RTCAO00442 FOXO3B-201ENST00000395675 1928 ntBASIC22.48■■□□□ 1.19
RTCAO00442 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCAO00442 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCAO00442 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCAO00442 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCAO00442 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTCAO00442 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTCAO00442 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTCAO00442 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTCAO00442 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTCAO00442 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTCAO00442 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RTCAO00442 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RTCAO00442 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.47■■□□□ 1.19
RTCAO00442 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTCAO00442 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTCAO00442 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTCAO00442 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.46■■□□□ 1.19
RTCAO00442 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
RTCAO00442 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTCAO00442 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTCAO00442 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RTCAO00442 TSPY13P-201ENST00000338964 914 ntBASIC22.45■■□□□ 1.18
RTCAO00442 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTCAO00442 AC012354.3-201ENST00000623734 483 ntBASIC22.45■■□□□ 1.18
RTCAO00442 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.45■■□□□ 1.18
RTCAO00442 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RTCAO00442 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTCAO00442 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTCAO00442 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.44■■□□□ 1.18
RTCAO00442 AL033527.3-201ENST00000566366 1196 ntBASIC22.44■■□□□ 1.18
RTCAO00442 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTCAO00442 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTCAO00442 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.43■■□□□ 1.18
RTCAO00442 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTCAO00442 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTCAO00442 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.43■■□□□ 1.18
RTCAO00442 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTCAO00442 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.43■■□□□ 1.18
RTCAO00442 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.43■■□□□ 1.18
RTCAO00442 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTCAO00442 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTCAO00442 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
RTCAO00442 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.42■■□□□ 1.18
RTCAO00442 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.42■■□□□ 1.18
RTCAO00442 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTCAO00442 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.42■■□□□ 1.18
RTCAO00442 AC139795.1-202ENST00000500444 432 ntBASIC22.42■■□□□ 1.18
RTCAO00442 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.42■■□□□ 1.18
RTCAO00442 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTCAO00442 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTCAO00442 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTCAO00442 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTCAO00442 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTCAO00442 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.41■■□□□ 1.18
RTCAO00442 LONRF2P2-201ENST00000439212 571 ntBASIC22.41■■□□□ 1.18
RTCAO00442 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTCAO00442 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTCAO00442 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.41■■□□□ 1.18
RTCAO00442 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTCAO00442 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.41■■□□□ 1.18
RTCAO00442 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCAO00442 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCAO00442 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCAO00442 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCAO00442 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.4■■□□□ 1.18
RTCAO00442 BHLHE23-202ENST00000612929 1109 ntBASIC22.4■■□□□ 1.18
RTCAO00442 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms