Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF11BO00300 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.78■■□□□ 1.08
TNFRSF11BO00300 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF11BO00300 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.78■■□□□ 1.08
TNFRSF11BO00300 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.77■■□□□ 1.08
TNFRSF11BO00300 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF11BO00300 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF11BO00300 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF11BO00300 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF11BO00300 AC012676.1-201ENST00000574705 1949 ntBASIC21.77■■□□□ 1.08
TNFRSF11BO00300 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF11BO00300 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.77■■□□□ 1.08
TNFRSF11BO00300 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.77■■□□□ 1.08
TNFRSF11BO00300 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF11BO00300 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF11BO00300 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TNFRSF11BO00300 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TNFRSF11BO00300 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.76■■□□□ 1.07
TNFRSF11BO00300 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TNFRSF11BO00300 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNFRSF11BO00300 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFRSF11BO00300 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TNFRSF11BO00300 ZNRF2P2-203ENST00000454624 420 ntBASIC21.75■■□□□ 1.07
TNFRSF11BO00300 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.75■■□□□ 1.07
TNFRSF11BO00300 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFRSF11BO00300 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TNFRSF11BO00300 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFRSF11BO00300 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFRSF11BO00300 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TNFRSF11BO00300 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFRSF11BO00300 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.74■■□□□ 1.07
TNFRSF11BO00300 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.73■■□□□ 1.07
TNFRSF11BO00300 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFRSF11BO00300 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TNFRSF11BO00300 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFRSF11BO00300 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.73■■□□□ 1.07
TNFRSF11BO00300 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TNFRSF11BO00300 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFRSF11BO00300 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.73■■□□□ 1.07
TNFRSF11BO00300 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF11BO00300 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF11BO00300 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.72■■□□□ 1.07
TNFRSF11BO00300 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF11BO00300 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF11BO00300 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF11BO00300 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF11BO00300 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.72■■□□□ 1.07
TNFRSF11BO00300 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.72■■□□□ 1.07
TNFRSF11BO00300 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF11BO00300 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF11BO00300 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF11BO00300 CR559946.2-201ENST00000623684 991 ntBASIC21.71■■□□□ 1.07
TNFRSF11BO00300 AC068473.5-201ENST00000616428 2072 ntBASIC21.71■■□□□ 1.07
TNFRSF11BO00300 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF11BO00300 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.71■■□□□ 1.07
TNFRSF11BO00300 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TNFRSF11BO00300 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.7■■□□□ 1.07
TNFRSF11BO00300 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.7■■□□□ 1.07
TNFRSF11BO00300 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TNFRSF11BO00300 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF11BO00300 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF11BO00300 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TNFRSF11BO00300 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF11BO00300 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.7■■□□□ 1.06
TNFRSF11BO00300 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF11BO00300 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF11BO00300 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF11BO00300 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF11BO00300 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.7■■□□□ 1.06
TNFRSF11BO00300 AC004812.2-201ENST00000611079 2094 ntBASIC21.7■■□□□ 1.06
TNFRSF11BO00300 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TNFRSF11BO00300 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF11BO00300 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF11BO00300 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF11BO00300 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF11BO00300 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TNFRSF11BO00300 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF11BO00300 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF11BO00300 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF11BO00300 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF11BO00300 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFRSF11BO00300 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
TNFRSF11BO00300 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms