Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA2E9PIF3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.48■■□□□ 1.03
NPIPA2E9PIF3 THA1P-201ENST00000590384 1145 ntBASIC21.48■■□□□ 1.03
NPIPA2E9PIF3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA2E9PIF3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA2E9PIF3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPA2E9PIF3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPA2E9PIF3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPA2E9PIF3 Z92544.1-202ENST00000571933 1220 ntBASIC21.47■■□□□ 1.03
NPIPA2E9PIF3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.47■■□□□ 1.03
NPIPA2E9PIF3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NPIPA2E9PIF3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.47■■□□□ 1.03
NPIPA2E9PIF3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPA2E9PIF3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPA2E9PIF3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.46■■□□□ 1.03
NPIPA2E9PIF3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPA2E9PIF3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPA2E9PIF3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPA2E9PIF3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 KRT18P24-201ENST00000344739 1156 ntBASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 KRT125P-201ENST00000546827 989 ntBASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPA2E9PIF3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 BX664725.1-201ENST00000438252 379 ntBASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
NPIPA2E9PIF3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPIPA2E9PIF3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
NPIPA2E9PIF3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
NPIPA2E9PIF3 AL356441.2-201ENST00000443009 864 ntBASIC21.43■■□□□ 1.02
NPIPA2E9PIF3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.43■■□□□ 1.02
NPIPA2E9PIF3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.43■■□□□ 1.02
NPIPA2E9PIF3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NPIPA2E9PIF3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NPIPA2E9PIF3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
NPIPA2E9PIF3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.42■■□□□ 1.02
NPIPA2E9PIF3 AC120024.1-201ENST00000562672 995 ntBASIC21.42■■□□□ 1.02
NPIPA2E9PIF3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NPIPA2E9PIF3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPA2E9PIF3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.41■■□□□ 1.02
NPIPA2E9PIF3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPA2E9PIF3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.41■■□□□ 1.02
NPIPA2E9PIF3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPA2E9PIF3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.41■■□□□ 1.02
NPIPA2E9PIF3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NPIPA2E9PIF3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
NPIPA2E9PIF3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.41■■□□□ 1.02
NPIPA2E9PIF3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPA2E9PIF3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 AL592295.1-201ENST00000400984 884 ntBASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 MIR4787-201ENST00000607364 84 ntBASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPA2E9PIF3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.39■■□□□ 1.02
NPIPA2E9PIF3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NPIPA2E9PIF3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.39■■□□□ 1.01
NPIPA2E9PIF3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPIPA2E9PIF3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPA2E9PIF3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPA2E9PIF3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
NPIPA2E9PIF3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.38■■□□□ 1.01
NPIPA2E9PIF3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.38■■□□□ 1.01
NPIPA2E9PIF3 AC096887.2-201ENST00000623443 1957 ntBASIC21.37■■□□□ 1.01
NPIPA2E9PIF3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPA2E9PIF3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPA2E9PIF3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.37■■□□□ 1.01
NPIPA2E9PIF3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
NPIPA2E9PIF3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPA2E9PIF3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPA2E9PIF3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.37■■□□□ 1.01
NPIPA2E9PIF3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPA2E9PIF3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPA2E9PIF3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.36■■□□□ 1.01
NPIPA2E9PIF3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
NPIPA2E9PIF3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.36■■□□□ 1.01
NPIPA2E9PIF3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.36■■□□□ 1.01
NPIPA2E9PIF3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPA2E9PIF3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms