Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MSGN1A6NI15 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSGN1A6NI15 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSGN1A6NI15 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSGN1A6NI15 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
MSGN1A6NI15 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MSGN1A6NI15 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
MSGN1A6NI15 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.5■□□□□ 0.71
MSGN1A6NI15 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
MSGN1A6NI15 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
MSGN1A6NI15 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MSGN1A6NI15 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSGN1A6NI15 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.5■□□□□ 0.71
MSGN1A6NI15 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MSGN1A6NI15 AP003733.4-201ENST00000623785 1697 ntBASIC19.49■□□□□ 0.71
MSGN1A6NI15 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSGN1A6NI15 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
MSGN1A6NI15 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MSGN1A6NI15 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.49■□□□□ 0.71
MSGN1A6NI15 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MSGN1A6NI15 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MSGN1A6NI15 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSGN1A6NI15 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MSGN1A6NI15 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSGN1A6NI15 MIR639-201ENST00000384974 98 ntBASIC19.48■□□□□ 0.71
MSGN1A6NI15 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.48■□□□□ 0.71
MSGN1A6NI15 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSGN1A6NI15 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MSGN1A6NI15 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSGN1A6NI15 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.47■□□□□ 0.71
MSGN1A6NI15 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSGN1A6NI15 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSGN1A6NI15 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
MSGN1A6NI15 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
MSGN1A6NI15 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.47■□□□□ 0.71
MSGN1A6NI15 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.47■□□□□ 0.71
MSGN1A6NI15 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSGN1A6NI15 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSGN1A6NI15 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSGN1A6NI15 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.46■□□□□ 0.71
MSGN1A6NI15 AC126177.7-201ENST00000547904 679 ntBASIC19.46■□□□□ 0.71
MSGN1A6NI15 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.46■□□□□ 0.71
MSGN1A6NI15 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.46■□□□□ 0.71
MSGN1A6NI15 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.46■□□□□ 0.71
MSGN1A6NI15 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSGN1A6NI15 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSGN1A6NI15 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSGN1A6NI15 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSGN1A6NI15 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MSGN1A6NI15 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSGN1A6NI15 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSGN1A6NI15 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSGN1A6NI15 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MSGN1A6NI15 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MSGN1A6NI15 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSGN1A6NI15 C9orf163-202ENST00000624034 2573 ntBASIC19.44■□□□□ 0.7
MSGN1A6NI15 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MSGN1A6NI15 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSGN1A6NI15 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSGN1A6NI15 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSGN1A6NI15 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSGN1A6NI15 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSGN1A6NI15 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MSGN1A6NI15 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSGN1A6NI15 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
MSGN1A6NI15 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MSGN1A6NI15 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MSGN1A6NI15 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSGN1A6NI15 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSGN1A6NI15 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSGN1A6NI15 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.43■□□□□ 0.7
MSGN1A6NI15 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MSGN1A6NI15 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.42■□□□□ 0.7
MSGN1A6NI15 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.42■□□□□ 0.7
MSGN1A6NI15 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.42■□□□□ 0.7
MSGN1A6NI15 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.42■□□□□ 0.7
MSGN1A6NI15 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.42■□□□□ 0.7
MSGN1A6NI15 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms