Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HTR3EA5X5Y0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTR3EA5X5Y0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.68■■□□□ 1.06
HTR3EA5X5Y0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.68■■□□□ 1.06
HTR3EA5X5Y0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR3EA5X5Y0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR3EA5X5Y0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.67■■□□□ 1.06
HTR3EA5X5Y0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
HTR3EA5X5Y0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR3EA5X5Y0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.67■■□□□ 1.06
HTR3EA5X5Y0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR3EA5X5Y0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HTR3EA5X5Y0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3EA5X5Y0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3EA5X5Y0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HTR3EA5X5Y0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HTR3EA5X5Y0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3EA5X5Y0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3EA5X5Y0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3EA5X5Y0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 AC022211.4-201ENST00000625094 2161 ntBASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3EA5X5Y0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HTR3EA5X5Y0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.64■■□□□ 1.06
HTR3EA5X5Y0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
HTR3EA5X5Y0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.64■■□□□ 1.05
HTR3EA5X5Y0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HTR3EA5X5Y0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.64■■□□□ 1.05
HTR3EA5X5Y0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.64■■□□□ 1.05
HTR3EA5X5Y0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HTR3EA5X5Y0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.64■■□□□ 1.05
HTR3EA5X5Y0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
HTR3EA5X5Y0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HTR3EA5X5Y0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HTR3EA5X5Y0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.63■■□□□ 1.05
HTR3EA5X5Y0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HTR3EA5X5Y0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
HTR3EA5X5Y0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
HTR3EA5X5Y0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
HTR3EA5X5Y0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HTR3EA5X5Y0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.62■■□□□ 1.05
HTR3EA5X5Y0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HTR3EA5X5Y0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HTR3EA5X5Y0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HTR3EA5X5Y0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HTR3EA5X5Y0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
HTR3EA5X5Y0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HTR3EA5X5Y0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3EA5X5Y0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3EA5X5Y0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3EA5X5Y0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3EA5X5Y0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3EA5X5Y0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3EA5X5Y0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3EA5X5Y0 AP003733.4-201ENST00000623785 1697 ntBASIC21.6■■□□□ 1.05
HTR3EA5X5Y0 KRT18P10-201ENST00000388836 1287 ntBASIC21.6■■□□□ 1.05
HTR3EA5X5Y0 RP9P-202ENST00000450133 1212 ntBASIC21.6■■□□□ 1.05
HTR3EA5X5Y0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
HTR3EA5X5Y0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR3EA5X5Y0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR3EA5X5Y0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.6■■□□□ 1.05
HTR3EA5X5Y0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR3EA5X5Y0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR3EA5X5Y0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
HTR3EA5X5Y0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTR3EA5X5Y0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.59■■□□□ 1.05
HTR3EA5X5Y0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HTR3EA5X5Y0 AC022413.1-201ENST00000624602 984 ntBASIC21.59■■□□□ 1.05
HTR3EA5X5Y0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTR3EA5X5Y0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTR3EA5X5Y0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HTR3EA5X5Y0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.58■■□□□ 1.05
HTR3EA5X5Y0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.58■■□□□ 1.05
HTR3EA5X5Y0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HTR3EA5X5Y0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HTR3EA5X5Y0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HTR3EA5X5Y0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HTR3EA5X5Y0 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.57■■□□□ 1.04
HTR3EA5X5Y0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HTR3EA5X5Y0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR3EA5X5Y0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR3EA5X5Y0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.56■■□□□ 1.04
HTR3EA5X5Y0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR3EA5X5Y0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR3EA5X5Y0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3EA5X5Y0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3EA5X5Y0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.55■■□□□ 1.04
HTR3EA5X5Y0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.55■■□□□ 1.04
HTR3EA5X5Y0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3EA5X5Y0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.55■■□□□ 1.04
HTR3EA5X5Y0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms