Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV4A0A0C4DH28 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV4A0A0C4DH28 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV4A0A0C4DH28 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.85■□□□□ 0.29
TRGV4A0A0C4DH28 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 AC018755.3-202ENST00000596210 929 ntBASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV4A0A0C4DH28 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRGV4A0A0C4DH28 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRGV4A0A0C4DH28 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRGV4A0A0C4DH28 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.83■□□□□ 0.28
TRGV4A0A0C4DH28 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV4A0A0C4DH28 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV4A0A0C4DH28 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV4A0A0C4DH28 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV4A0A0C4DH28 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV4A0A0C4DH28 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV4A0A0C4DH28 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV4A0A0C4DH28 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV4A0A0C4DH28 AC022211.4-201ENST00000625094 2161 ntBASIC16.82■□□□□ 0.28
TRGV4A0A0C4DH28 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV4A0A0C4DH28 AC142381.3-201ENST00000568208 1670 ntBASIC16.81■□□□□ 0.28
TRGV4A0A0C4DH28 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.81■□□□□ 0.28
TRGV4A0A0C4DH28 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.81■□□□□ 0.28
TRGV4A0A0C4DH28 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRGV4A0A0C4DH28 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV4A0A0C4DH28 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.81■□□□□ 0.28
TRGV4A0A0C4DH28 AL592293.1-201ENST00000502889 1188 ntBASIC16.81■□□□□ 0.28
TRGV4A0A0C4DH28 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRGV4A0A0C4DH28 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV4A0A0C4DH28 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV4A0A0C4DH28 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV4A0A0C4DH28 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.79■□□□□ 0.28
TRGV4A0A0C4DH28 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV4A0A0C4DH28 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.78■□□□□ 0.28
TRGV4A0A0C4DH28 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV4A0A0C4DH28 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRGV4A0A0C4DH28 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.78■□□□□ 0.28
TRGV4A0A0C4DH28 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 ABHD17AP5-201ENST00000580133 923 ntBASIC16.77■□□□□ 0.28
TRGV4A0A0C4DH28 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TRGV4A0A0C4DH28 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV4A0A0C4DH28 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV4A0A0C4DH28 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms