Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV12-3A0A0B4J271 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV12-3A0A0B4J271 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV12-3A0A0B4J271 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV12-3A0A0B4J271 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRAV12-3A0A0B4J271 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.45■□□□□ 0.38
TRAV12-3A0A0B4J271 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV12-3A0A0B4J271 AL139125.2-201ENST00000623134 1869 ntBASIC17.45■□□□□ 0.38
TRAV12-3A0A0B4J271 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV12-3A0A0B4J271 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV12-3A0A0B4J271 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV12-3A0A0B4J271 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV12-3A0A0B4J271 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV12-3A0A0B4J271 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV12-3A0A0B4J271 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRAV12-3A0A0B4J271 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV12-3A0A0B4J271 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV12-3A0A0B4J271 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV12-3A0A0B4J271 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV12-3A0A0B4J271 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV12-3A0A0B4J271 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-3A0A0B4J271 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-3A0A0B4J271 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRAV12-3A0A0B4J271 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-3A0A0B4J271 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-3A0A0B4J271 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV12-3A0A0B4J271 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV12-3A0A0B4J271 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-3A0A0B4J271 AP003733.4-201ENST00000623785 1697 ntBASIC17.42■□□□□ 0.38
TRAV12-3A0A0B4J271 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV12-3A0A0B4J271 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV12-3A0A0B4J271 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV12-3A0A0B4J271 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV12-3A0A0B4J271 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV12-3A0A0B4J271 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV12-3A0A0B4J271 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV12-3A0A0B4J271 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV12-3A0A0B4J271 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV12-3A0A0B4J271 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAV12-3A0A0B4J271 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV12-3A0A0B4J271 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV12-3A0A0B4J271 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV12-3A0A0B4J271 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.41■□□□□ 0.38
TRAV12-3A0A0B4J271 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV12-3A0A0B4J271 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV12-3A0A0B4J271 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-3A0A0B4J271 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
TRAV12-3A0A0B4J271 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 AC026202.3-201ENST00000600805 1127 ntBASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 RAP2CP1-202ENST00000605179 643 ntBASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV12-3A0A0B4J271 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV12-3A0A0B4J271 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV12-3A0A0B4J271 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV12-3A0A0B4J271 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAV12-3A0A0B4J271 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV12-3A0A0B4J271 LINC01124-201ENST00000409786 2117 ntBASIC17.38■□□□□ 0.37
TRAV12-3A0A0B4J271 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV12-3A0A0B4J271 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV12-3A0A0B4J271 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-3A0A0B4J271 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV12-3A0A0B4J271 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV12-3A0A0B4J271 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV12-3A0A0B4J271 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV12-3A0A0B4J271 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV12-3A0A0B4J271 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV12-3A0A0B4J271 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms