Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 AC087741.3-201ENST00000624270 1347 ntBASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV23DV6A0A075B6W5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV23DV6A0A075B6W5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV23DV6A0A075B6W5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV23DV6A0A075B6W5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV23DV6A0A075B6W5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV23DV6A0A075B6W5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV23DV6A0A075B6W5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV23DV6A0A075B6W5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV23DV6A0A075B6W5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV23DV6A0A075B6W5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV23DV6A0A075B6W5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV23DV6A0A075B6W5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV23DV6A0A075B6W5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV23DV6A0A075B6W5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV23DV6A0A075B6W5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV23DV6A0A075B6W5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV23DV6A0A075B6W5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV23DV6A0A075B6W5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV23DV6A0A075B6W5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRAV23DV6A0A075B6W5 AC141586.4-201ENST00000624558 1573 ntBASIC15.14■□□□□ 0.01
TRAV23DV6A0A075B6W5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV23DV6A0A075B6W5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV23DV6A0A075B6W5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV23DV6A0A075B6W5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV23DV6A0A075B6W5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV23DV6A0A075B6W5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV23DV6A0A075B6W5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV23DV6A0A075B6W5 AC021231.2-201ENST00000594613 730 ntBASIC15.13■□□□□ 0.01
TRAV23DV6A0A075B6W5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV23DV6A0A075B6W5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV23DV6A0A075B6W5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV23DV6A0A075B6W5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV23DV6A0A075B6W5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV23DV6A0A075B6W5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV23DV6A0A075B6W5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV23DV6A0A075B6W5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV23DV6A0A075B6W5 DUX4L29-201ENST00000425409 679 ntBASIC15.11■□□□□ 0.01
TRAV23DV6A0A075B6W5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV23DV6A0A075B6W5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV23DV6A0A075B6W5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV23DV6A0A075B6W5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV23DV6A0A075B6W5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV23DV6A0A075B6W5 AL359504.2-201ENST00000605506 1601 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms