Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
TRAV6A0A075B6T7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAV6A0A075B6T7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV6A0A075B6T7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV6A0A075B6T7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV6A0A075B6T7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.14■□□□□ 0.81
TRAV6A0A075B6T7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAV6A0A075B6T7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.14■□□□□ 0.81
TRAV6A0A075B6T7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV6A0A075B6T7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV6A0A075B6T7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRAV6A0A075B6T7 EP400NL-214ENST00000641289 2402 ntBASIC20.13■□□□□ 0.81
TRAV6A0A075B6T7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV6A0A075B6T7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TRAV6A0A075B6T7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TRAV6A0A075B6T7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV6A0A075B6T7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV6A0A075B6T7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV6A0A075B6T7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV6A0A075B6T7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV6A0A075B6T7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV6A0A075B6T7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV6A0A075B6T7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV6A0A075B6T7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV6A0A075B6T7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV6A0A075B6T7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV6A0A075B6T7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV6A0A075B6T7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.12■□□□□ 0.81
TRAV6A0A075B6T7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.12■□□□□ 0.81
TRAV6A0A075B6T7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.12■□□□□ 0.81
TRAV6A0A075B6T7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV6A0A075B6T7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRAV6A0A075B6T7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV6A0A075B6T7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV6A0A075B6T7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV6A0A075B6T7 SLC6A10P-202ENST00000431994 2058 ntBASIC20.11■□□□□ 0.81
TRAV6A0A075B6T7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV6A0A075B6T7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV6A0A075B6T7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV6A0A075B6T7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV6A0A075B6T7 AL391121.1-201ENST00000607967 1349 ntBASIC20.1■□□□□ 0.81
TRAV6A0A075B6T7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV6A0A075B6T7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV6A0A075B6T7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV6A0A075B6T7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV6A0A075B6T7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV6A0A075B6T7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV6A0A075B6T7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV6A0A075B6T7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV6A0A075B6T7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV6A0A075B6T7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV6A0A075B6T7 SETD8P1-201ENST00000623146 1180 ntBASIC20.09■□□□□ 0.81
TRAV6A0A075B6T7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV6A0A075B6T7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV6A0A075B6T7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
TRAV6A0A075B6T7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV6A0A075B6T7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV6A0A075B6T7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRAV6A0A075B6T7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV6A0A075B6T7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.08■□□□□ 0.81
TRAV6A0A075B6T7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV6A0A075B6T7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV6A0A075B6T7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
TRAV6A0A075B6T7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV6A0A075B6T7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV6A0A075B6T7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 AC233723.2-201ENST00000623798 2106 ntBASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 AC110285.7-201ENST00000624417 1536 ntBASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
TRAV6A0A075B6T7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms