Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.09■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.09■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.08■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.08■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 GUSBP5-201ENST00000418136 578 ntBASIC23.08■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.08■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 AC097639.1-201ENST00000565519 1891 ntBASIC23.07■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.06■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 FOXO3B-201ENST00000395675 1928 ntBASIC23.04■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.04■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.04■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 BX664725.1-201ENST00000438252 379 ntBASIC23.04■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.04■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.04■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.03■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.03■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 KRT125P-201ENST00000546827 989 ntBASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 MIR4787-201ENST00000607364 84 ntBASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRBV23OR9-2A0A075B6M9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 Z92544.1-202ENST00000571933 1220 ntBASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 AC091060.1-201ENST00000623524 1766 ntBASIC23■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.99■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 AC131212.1-201ENST00000613771 668 ntBASIC22.99■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 MIR4281-201ENST00000580852 62 ntBASIC22.98■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.98■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.98■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.97■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 AL356441.2-201ENST00000443009 864 ntBASIC22.96■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 AC137630.3-201ENST00000607245 391 ntBASIC22.96■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRBV23OR9-2A0A075B6M9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms