Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 DMBT1P1-203ENST00000636837 4628 ntBASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 DGCR10-201ENST00000609839 495 ntBASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 KRT89P-201ENST00000620027 1478 ntBASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 AC148477.4-201ENST00000613430 1793 ntBASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AJ011931.1-201ENST00000618749 2492 ntBASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AL122018.1-201ENST00000446607 2310 ntBASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AC097488.1-201ENST00000507834 756 ntBASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AC083906.2-201ENST00000511578 360 ntBASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 DUX4L17-201ENST00000557360 1267 ntBASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 MIR3917-201ENST00000580971 93 ntBASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AC024563.2-201ENST00000603282 481 ntBASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 AC097374.2-201ENST00000618617 1306 ntBASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAPPC1Q9Y5R8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 LINC01144-201ENST00000626198 1710 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms