Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 LINC01144-201ENST00000626198 1710 ntBASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RHBDD3Q9Y3P4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 HMGA1P7-201ENST00000406908 502 ntBASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 Z83851.2-201ENST00000609564 659 ntBASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RHBDD3Q9Y3P4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 LINC02447-202ENST00000501888 2146 ntBASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 AL645728.2-201ENST00000641974 660 ntBASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 AC069224.1-201ENST00000566372 1715 ntBASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.26□□□□□ -0.13
RHBDD3Q9Y3P4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RHBDD3Q9Y3P4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RHBDD3Q9Y3P4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RHBDD3Q9Y3P4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RHBDD3Q9Y3P4 AC104109.2-201ENST00000602919 1418 ntBASIC14.25□□□□□ -0.13
RHBDD3Q9Y3P4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RHBDD3Q9Y3P4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RHBDD3Q9Y3P4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RHBDD3Q9Y3P4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RHBDD3Q9Y3P4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RHBDD3Q9Y3P4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms