Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 AC004461.1-201ENST00000412461 403 ntBASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 AC061975.2-201ENST00000581722 295 ntBASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 AC024267.1-201ENST00000582320 895 ntBASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 AC084121.4-201ENST00000641598 221 ntBASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 AF228730.8-201ENST00000642140 221 ntBASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 AC008677.1-201ENST00000519230 1561 ntBASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 AC011270.2-201ENST00000624293 2550 ntBASIC16.84■□□□□ 0.29
AP4E1Q9UPM8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP4E1Q9UPM8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
AP4E1Q9UPM8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
AP4E1Q9UPM8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
AP4E1Q9UPM8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP4E1Q9UPM8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 FAM220BP-201ENST00000377689 816 ntBASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 AC005237.2-201ENST00000434368 219 ntBASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 AP000344.2-201ENST00000512987 629 ntBASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
AP4E1Q9UPM8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 AC112504.1-201ENST00000623415 1841 ntBASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms