Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 AC009407.1-201ENST00000568958 598 ntBASIC17.25■□□□□ 0.35
SIX4Q9UIU6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 AL033527.5-202ENST00000641632 1098 ntBASIC17.25■□□□□ 0.35
SIX4Q9UIU6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SIX4Q9UIU6 LINC02447-202ENST00000501888 2146 ntBASIC17.24■□□□□ 0.35
SIX4Q9UIU6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 AZGP1P1-201ENST00000411909 902 ntBASIC17.24■□□□□ 0.35
SIX4Q9UIU6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 AL096865.1-201ENST00000606796 927 ntBASIC17.24■□□□□ 0.35
SIX4Q9UIU6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SIX4Q9UIU6 AC112504.1-201ENST00000623415 1841 ntBASIC17.24■□□□□ 0.35
SIX4Q9UIU6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.23■□□□□ 0.35
SIX4Q9UIU6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 RNA5SP421-201ENST00000516864 134 ntBASIC17.23■□□□□ 0.35
SIX4Q9UIU6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 AC010491.1-201ENST00000563101 2797 ntBASIC17.23■□□□□ 0.35
SIX4Q9UIU6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 AL513523.2-202ENST00000427283 2040 ntBASIC17.23■□□□□ 0.35
SIX4Q9UIU6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.23■□□□□ 0.35
SIX4Q9UIU6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms